Training materials
-
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1 -
e-learning
Genome annotation with Maker
••• advancedGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenomics Genome Annotation eukaryote -
e-learning
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod … -
e-learning
Genome Annotation
• beginnerGenomics Genome Annotation prokaryote work-in-progress -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerGenomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy … -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
Chloroplast genome assembly
• beginnerSequence assembly Assembly biodiversity jbrowse1 nanopore plants -
e-learning
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote