Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Sequence databases
    • Assembly6
    • Sequence assembly6
    • Biological sequences4
    • Epidemiology4
    • Exomes4
    • Genome annotation4
    • Genomes4
    • Genomics4
    • Personal genomics4
    • Public health4
    • Public health and epidemiology4
    • Sequence analysis4
    • Synthetic genomics4
    • Viral genomics4
    • Whole genomes4
    • Antimicrobial stewardship3
    • Community analysis3
    • Environmental microbiology3
    • Medical microbiology3
    • Metagenomics3
    • Microbial ecology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Microbiome3
    • Molecular community analysis3
    • Molecular infection biology3
    • Molecular microbiology3
    • Shotgun metagenomics3
    • Comparative transcriptomics2
    • De novo genome sequencing2
    • Epigenomics2
    • Genome sequencing2
    • Taxonomy2
    • Transcriptome2
    • Transcriptomics2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Biodiversity1
    • Communicable disease1
    • Computational ecology1
    • DNA variation1
    • Disease1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Extensive drug resistance (XDR)1
    • Genetic variation1
    • Genomic variation1
    • Infectious disease1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Mutation1
    • Pandrug resistance (PDR)1
    • Pathology1
    • Polymorphism1
    • Somatic mutations1
    • Total drug resistance (TDR)1
    • Transmissible disease1
    • Show N_FILTERS more
    • Tool
    • FastQC
    • Galaxy8
    • kraken24
    • taxonomy_krona_chart4
    • KrakenTools3
    • NanoPlot3
    • fastp3
    • BamTools2
    • Cutadapt2
    • FASTQE2
    • SAMtools2
    • pycoQC2
    • ABRicate1
    • BCFtools1
    • BEDTools1
    • BLAST1
    • Bandage1
    • Bracken1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Diamond1
    • FastTree1
    • Flye1
    • JBrowse1
    • MLST1
    • Medaka1
    • MetaPhlAn1
    • Minimap21
    • MultiQC1
    • Newick Utilities1
    • ggplot21
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training4
    • Show N_FILTERS more
    • Keyword
    • Microbiome2
    • Sequence analysis2
    • microgalaxy2
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • beer1
    • citizen science1
    • cyoa1
    • metagenomics1
    • nanopore1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner4
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International4
    • Show N_FILTERS more
    • Target audience
    • Students4
    • Show N_FILTERS more
    • Author
    • Bérénice Batut4
    • Alexandre Cormier2
    • Anthony Bretaudeau2
    • Erwan Corre2
    • Laura Leroi2
    • Stéphanie Robin2
    • Cameron Hyde1
    • Engy Nasr1
    • Maria Doyle1
    • Paul Zierep1
    • Polina Polunina1
    • Siyu Chen1
    • Teresa Müller1
    • Show N_FILTERS more
    • Contributor
    • Cristóbal Gallardo
    • Bérénice Batut8
    • Helena Rasche8
    • Saskia Hiltemann7
    • Björn Grüning4
    • Anthony Bretaudeau3
    • Nicola Soranzo3
    • Paul Zierep3
    • William Durand3
    • Alexandre Cormier2
    • Christine Oger2
    • Engy Nasr2
    • Mateo Boudet2
    • Natalie Kucher2
    • Niall Beard2
    • Swathi Nataraj2
    • Teresa Müller2
    • Wolfgang Maier2
    • Alex Ostrovsky1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Anton Nekrutenko1
    • Anup Kumar1
    • Ava Hoffman1
    • Candace Savonen1
    • Deepti Varshney1
    • Elizabeth Humphries1
    • Frederick Tan1
    • Gildas Le Corguillé1
    • Hans-Rudolf Hotz1
    • Katherine Cox1
    • Maria Doyle1
    • Matthias Bernt1
    • Mélanie Petera1
    • Nate Coraor1
    • Nuwan Goonasekera1
    • Simon Bray1
    • Siyu Chen1
    • Vijay1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets4
    • Associated Workflows4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Sequence databases

and Tools: FastQC

and Contributors: Cristóbal Gallardo

4 materials found
  • e-learning

    Identification of the micro-organisms in a beer using Nanopore sequencing

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Quality Control

    • beginner
    Sequence analysis
  • slides

    Quality Control

    • beginner
    Sequence analysis
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.