Materials - TeSS Sandbox (Training eSupport System)

Training materials

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Scientific topics: Assembly

and Difficulty level: Beginner

and Contributors: Deepti Varshney

7 materials found

e-learning

Decontamination of a genome assembly

• beginner
Sequence assembly Genomics Biodiversity Assembly biodiversity
e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
e-learning

Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

• beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
e-learning

Chloroplast genome assembly

• beginner
Sequence assembly Assembly biodiversity jbrowse1 nanopore plants
e-learning

Large genome assembly and polishing

• beginner
Sequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing
e-learning

Binning of metagenomic sequencing data

• beginner
Metagenomics Microbial ecology Sequence assembly Microbiome binning metagenomics microgalaxy
e-learning

ERGA post-assembly QC

• beginner
Sequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants