Training materials
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slides
The Pangeo ecosystem
• beginnerClimate climate -
e-learning
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
e-learning
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
•• intermediateSequence assembly Assembly covid19 -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
e-learning
Group tags for complex experimental designs
• beginnerUsing Galaxy and Managing your Data -
e-learning
Differential abundance testing of small RNAs
• beginnerTranscriptomics -
e-learning
CLIP-Seq data analysis from pre-processing to motif detection
• beginnerTranscriptomics -
e-learning
GO Enrichment Analysis
• beginnerTranscriptomics -
e-learning
Reference-based RNAseq data analysis (long)
• beginnerTranscriptomics