Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Tool
    • Galaxy12
    • SCANPY7
    • anndata3
    • DropletUtils2
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC2
    • annotatemyids2
    • Alevin1
    • RStudio1
    • Salmon1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training16
    • Show N_FILTERS more
    • Keyword
    • Single Cell
    • MIGHTS9
    • paper-replication9
    • data management5
    • jupyter-notebook4
    • data import3
    • Contributing to the Galaxy Training Material2
    • 10x1
    • Metabolomics1
    • rmarkdown-notebook1
    • transcriptomics1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner16
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International16
    • Show N_FILTERS more
    • Target audience
    • Students16
    • Show N_FILTERS more
    • Author
    • Wendi Bacon10
    • Julia Jakiela7
    • Mehmet Tekman3
    • Morgan Howells3
    • Camila Goclowski1
    • Jonathan Manning1
    • Marisa Loach1
    • Show N_FILTERS more
    • Contributor
    • Julia Jakiela
    • Saskia Hiltemann32
    • Björn Grüning31
    • Wendi Bacon30
    • Helena Rasche29
    • Mehmet Tekman27
    • Pavankumar Videm25
    • Pablo Moreno11
    • Marisa Loach8
    • Bérénice Batut5
    • Martin Čech5
    • Morgan Howells5
    • Nicola Soranzo5
    • Anthony Bretaudeau4
    • Teresa Müller4
    • Armin Dadras3
    • Matthias Bernt3
    • Simon Bray3
    • Stéphanie Robin3
    • Timon Schlegel3
    • Amirhossein Naghsh Nilchi2
    • Beatriz Serrano-Solano2
    • Camila Goclowski2
    • Carlos Chee Mendonça2
    • Cristóbal Gallardo2
    • David López2
    • Diana Chiang Jurado2
    • Gildas Le Corguillé2
    • Hans-Rudolf Hotz2
    • Jonathan Manning2
    • Donny Vrins1
    • Graeme Tyson1
    • Graham Etherington1
    • Lucille Delisle1
    • Marius van den Beek1
    • Mennayousef1
    • Mohua Das1
    • Nate Coraor1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets13
    • Associated Workflows12
    • Jupyter Notebook (with Solutions)3
    • Jupyter Notebook (without Solutions)3
    • Quarto/RMarkdown Notebook1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Keywords: Single Cell

and Contributors: Julia Jakiela

and Resource type: e-learning

16 e-learning materials found
  • e-learning

    Converting between common single cell data formats

    • beginner
    Single Cell data import data management
  • e-learning

    Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution

    • beginner
    Single Cell data management transcriptomics
  • e-learning

    Converting NCBI Data to the AnnData Format

    • beginner
    Single Cell data import data management
  • e-learning

    Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution

    • beginner
    Single Cell data management
  • e-learning

    Importing files from public atlases

    • beginner
    Single Cell data import data management
  • e-learning

    Filter, plot, and explore single cell RNA-seq data with Seurat

    • beginner
    MIGHTS Single Cell paper-replication
  • e-learning

    Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)

    • beginner
    MIGHTS Single Cell jupyter-notebook paper-replication
  • e-learning

    Generating a single cell matrix using Alevin and combining datasets (bash + R)

    • beginner
    10x MIGHTS Single Cell jupyter-notebook paper-replication
  • e-learning

    Removing the effects of the cell cycle

    • beginner
    Single Cell
  • e-learning

    Generating a single cell matrix using Alevin

    • beginner
    MIGHTS Single Cell paper-replication
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.