Training materials
Contributors: Pavankumar Videm
and Related resources: Associated Training Datasets
and Tools: DeepTools
3 materials found
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Scientific topic
- Epigenomics3
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Tool
- DeepTools
- Galaxy27
- SCANPY9
- MultiQC4
- anndata4
- BEDTools3
- DropletUtils3
- Falco3
- FastQC3
- MACS3
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- BWA2
- Bowtie 22
- RSeQC2
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- Alevin1
- BamTools1
- Biopython1
- Cutadapt1
- DESeq21
- FeatureCounts1
- GOseq1
- IDR1
- IsoformSwitchAnalyzeR1
- JBrowse 21
- MEME1
- MethylDackel1
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC1
- PfamScan1
- R1
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- StringTie1
- Targetfinder.org1
- UCSC Genome Browser Utilities1
- Unipept1
- annotatemyids1
- blockbuster1
- compute_sequence_length1
- edgeR1
- epiScanpy1
- fastp1
- gffcompare1
- gffread1
- ggplot21
- miRDeep21
- pathview1
- rnaQUAST1
- scp1
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Content provider
- Galaxy Training3
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Keyword
- Epigenetics3
- ChIP-seq1
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Difficulty level
- Beginner3
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Target audience
- Students3
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Contributor
- Pavankumar Videm
- Saskia Hiltemann12
- Björn Grüning11
- Helena Rasche11
- Bérénice Batut8
- Nicola Soranzo6
- Gildas Le Corguillé5
- Niall Beard5
- Florian Heyl4
- Armin Dadras3
- Cristóbal Gallardo3
- Lucille Delisle3
- Martin Čech3
- William Durand3
- Fidel Ramirez2
- Joachim Wolff2
- Leily Rabbani2
- Mallory Freeberg2
- Maria Doyle2
- Wolfgang Maier2
- Anthony Bretaudeau1
- Anup Kumar1
- Delphine Lariviere1
- Friederike Dündar1
- Hans-Rudolf Hotz1
- James Taylor1
- Mo Heydarian1
- Yvan Le Bras1
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Resource type
- e-learning3
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- Associated Training Datasets
- Associated Workflows3
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