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Tools: Galaxy

and Contributors: Pavankumar Videm

and Resource type: e-learning

30 e-learning materials found
  • e-learning

    Pseudobulk Analysis with Decoupler and EdgeR

    • beginner
    Single Cell pseudobulk transcriptomics
  • e-learning

    Single Cell Proteomics data analysis with bioconductor-scp

    • beginner
    Proteomics
  • e-learning

    Clustering 3K PBMCs with Seurat

    • beginner
    10x Single Cell
  • e-learning

    Single-cell ATAC-seq standard processing with SnapATAC2

    •• intermediate
    10x Single Cell epigenetics single-cell
  • e-learning

    Genome-wide alternative splicing analysis

    ••• advanced
    Transcriptomics alternative splicing isoform switching
  • e-learning

    Converting between common single cell data formats

    • beginner
    Single Cell data import data management
  • e-learning

    Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution

    • beginner
    Single Cell data management transcriptomics
  • e-learning

    Converting NCBI Data to the AnnData Format

    • beginner
    Single Cell data import data management
  • e-learning

    Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution

    • beginner
    Single Cell data management
  • e-learning

    Importing files from public atlases

    • beginner
    Single Cell data import data management
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