Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Computational ecology1
    • Ecoinformatics1
    • Ecological informatics1
    • Ecology1
    • Ecosystem science1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • SCANPY12
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • FastQC4
    • DropletUtils3
    • anndata3
    • annotatemyids3
    • BWA2
    • FASTX-Toolkit2
    • RStudio2
    • STAR2
    • ggplot22
    • Alevin1
    • BEDTools1
    • Biopython1
    • GOEnrichment1
    • MACS1
    • MultiQC1
    • SAMtools1
    • Salmon1
    • Seurat1
    • UMI-tools1
    • compute_sequence_length1
    • epiScanpy1
    • g:Profiler1
    • seqtk1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training32
    • Show N_FILTERS more
    • Keyword
    • Single Cell25
    • paper-replication7
    • MIGHTS6
    • 10x5
    • data management5
    • transcriptomics4
    • Introduction to Galaxy Analyses3
    • data import3
    • Contributing to the Galaxy Training Material2
    • epigenetics2
    • Ecology1
    • GO enrichment1
    • Remote sensing1
    • Using Galaxy and Managing your Data1
    • biodiversity1
    • español1
    • interactive-tools1
    • plants1
    • single cell1
    • single-cell1
    • work-in-progress1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner31
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International32
    • Show N_FILTERS more
    • Target audience
    • Students30
    • Instructors2
    • Show N_FILTERS more
    • Author
    • Mehmet Tekman10
    • Wendi Bacon10
    • Julia Jakiela5
    • Bérénice Batut4
    • Pavankumar Videm4
    • Helena Rasche3
    • Marisa Loach3
    • Morgan Howells3
    • Saskia Hiltemann3
    • Anne Fouilloux2
    • Hans-Rudolf Hotz2
    • Nicola Soranzo2
    • Ahmed Hamid Awan1
    • Anika Erxleben1
    • Anna Syme1
    • Beatriz Serrano-Solano1
    • Camila Goclowski1
    • Christopher Barnett1
    • Cristóbal Gallardo1
    • Daniel Blankenberg1
    • Dave Clements1
    • Diana Chiang Jurado1
    • Jonathan Manning1
    • Lucille Delisle1
    • Marie Josse1
    • Menna Gamal1
    • Michele Maroni1
    • Nadia Goué1
    • Olha Nahorna1
    • Timon Schlegel1
    • Wolfgang Maier1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Contributor
    • Wendi Bacon
    • Saskia Hiltemann279
    • Helena Rasche249
    • Björn Grüning229
    • Bérénice Batut132
    • Nicola Soranzo67
    • Anthony Bretaudeau55
    • Cristóbal Gallardo55
    • Martin Čech47
    • Niall Beard42
    • Teresa Müller36
    • Armin Dadras35
    • Gildas Le Corguillé33
    • Mehmet Tekman32
    • Wolfgang Maier32
    • Yvan Le Bras31
    • Melanie Föll30
    • Pavankumar Videm30
    • William Durand29
    • Subina Mehta25
    • Nate Coraor22
    • Simon Bray22
    • Maria Doyle20
    • Beatriz Serrano-Solano19
    • Anup Kumar17
    • Anne Fouilloux15
    • Deepti Varshney15
    • Julia Jakiela14
    • Anton Nekrutenko13
    • Lucille Delisle13
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Mélanie Petera11
    • Pablo Moreno11
    • Marius van den Beek10
    • Simon Gladman10
    • Marisa Loach9
    • Matthias Bernt9
    • Paul Zierep9
    • Stéphanie Robin9
    • David López8
    • Delphine Lariviere8
    • Leonid Kostrykin8
    • Marie Josse8
    • Peter van Heusden8
    • Verena Moosmann8
    • Kaivan Kamali7
    • Alexandre Cormier6
    • Anna Syme6
    • Hans-Rudolf Hotz6
    • Linelle Abueg6
    • Mallory Freeberg6
    • Morgan Howells6
    • Alireza Khanteymoori5
    • Bert Droesbeke5
    • Clea Siguret5
    • Clemens Blank5
    • Christopher Barnett4
    • Coline Royaux4
    • Dave Clements4
    • Diana Chiang Jurado4
    • Florian Christoph Sigloch4
    • Florian Heyl4
    • Amirhossein Naghsh Nilchi3
    • Bazante Sanders3
    • Ekaterina Polkh3
    • Engy Nasr3
    • Fabio Cumbo3
    • Jasper Ouwerkerk3
    • Joachim Wolff3
    • Katarzyna Kamieniecka3
    • Khaled Jum'ah3
    • Mateo Boudet3
    • Mateusz Kuzak3
    • Miaomiao Zhou3
    • Riccardo Massei3
    • Timon Schlegel3
    • Alex Ostrovsky2
    • Anika Erxleben2
    • Carlos Chee Mendonça2
    • Christoph Stritt2
    • CicoZhang2
    • Daniela Schneider2
    • Donny Vrins2
    • Enis Afgan2
    • Esteban Perez-Wohlfeil2
    • Fidel Ramirez2
    • Florence Combes2
    • Fotis E. Psomopoulos2
    • Graeme Tyson2
    • Helge Hecht2
    • Jayadev Joshi2
    • Jennifer Hillman-Jackson2
    • Jonathan Kreplak2
    • Jonathan Manning2
    • Kristina Gomoryova2
    • Laura Leroi2
    • Leily Rabbani2
    • Melissa Burke2
    • Michelle Terese Savage2
    • Show N_FILTERS more
    • Resource type
    • e-learning31
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows30
    • Associated Training Datasets26
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: Galaxy

and Contributors: Wendi Bacon

32 materials found
  • e-learning

    Evaluating Reference Data for Bulk RNA Deconvolution

    • beginner
    Single Cell transcriptomics
  • e-learning

    Clustering 3K PBMCs with Seurat

    • beginner
    10x Single Cell
  • e-learning

    GO Enrichment Analysis on Single-Cell RNA-Seq Data

    • beginner
    GO enrichment Single Cell single cell
  • e-learning

    Single-cell ATAC-seq standard processing with SnapATAC2

    •• intermediate
    10x Single Cell epigenetics single-cell
  • e-learning

    Sentinel 2 biodiversity

    • beginner
    Ecology Remote sensing biodiversity
  • e-learning

    Converting between common single cell data formats

    • beginner
    Single Cell data import data management
  • e-learning

    Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution

    • beginner
    Single Cell data management transcriptomics
  • e-learning

    Converting NCBI Data to the AnnData Format

    • beginner
    Single Cell data import data management
  • e-learning

    Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution

    • beginner
    Single Cell data management
  • e-learning

    Importing files from public atlases

    • beginner
    Single Cell data import data management
  • 1
  • 2
  • 3
  • 4
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.