Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly1
    • Biological sequences1
    • Community analysis1
    • Comparative transcriptomics1
    • DNA variation1
    • Disease1
    • Environmental microbiology1
    • Epidemiology1
    • Genetic variation1
    • Genomic variation1
    • Metagenomics1
    • Microbial ecology1
    • Microbiome1
    • Molecular community analysis1
    • Mutation1
    • Pathology1
    • Polymorphism1
    • Public health1
    • Public health and epidemiology1
    • Sequence analysis1
    • Sequence assembly1
    • Sequence databases1
    • Shotgun metagenomics1
    • Somatic mutations1
    • Taxonomy1
    • Transcriptome1
    • Transcriptomics1
    • Show N_FILTERS more
    • Tool
    • ggplot2
    • Galaxy31
    • SAMtools12
    • BWA9
    • fastp9
    • Falco8
    • MultiQC8
    • BCFtools7
    • FastQC7
    • Trimmomatic5
    • seqtk4
    • BEDTools3
    • BamTools3
    • Cutadapt3
    • FreeBayes3
    • GEMINI3
    • MAFFT3
    • NanoPlot3
    • QualiMap3
    • kraken23
    • BLAST2
    • Bandage2
    • COMBAT-TB Workbench2
    • DeepTools2
    • RSeQC2
    • SRA Software Toolkit2
    • STAR2
    • Stacks2
    • Trim Galore2
    • compute_sequence_length2
    • iVar2
    • pyGenomeTracks2
    • snippy2
    • tb-profiler2
    • ABRicate1
    • Bowtie 21
    • Bracken1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • DESeq21
    • EGA1
    • FASTQE1
    • FASTX-Toolkit1
    • FREEC1
    • FastTree1
    • FeatureCounts1
    • Flye1
    • GOseq1
    • Galactic Circos1
    • IDR1
    • IsoformSwitchAnalyzeR1
    • JBrowse1
    • Jvarkit1
    • KrakenTools1
    • MACS1
    • MEME1
    • MLST1
    • MSstats1
    • MaxQuant1
    • Medaka1
    • MethylDackel1
    • Minimap21
    • NCBI Resources1
    • Newick Utilities1
    • Nextclade1
    • PfamScan1
    • QUAST1
    • R1
    • RAxML1
    • Recentrifuge1
    • SeqCode1
    • StringTie1
    • UCSC Genome Browser Utilities1
    • Unicycler1
    • VAPOR1
    • VarScan1
    • Vcflib1
    • gffcompare1
    • gffread1
    • iqtree1
    • lofreq1
    • pangolin1
    • pathview1
    • pycoQC1
    • rnaQUAST1
    • shovill1
    • snpEff1
    • taxonomy_krona_chart1
    • varVAMP1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training3
    • Show N_FILTERS more
    • Keyword
    • cyoa2
    • Heatmap1
    • Microbiome1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • QC1
    • Transcriptomics1
    • Variant Analysis1
    • bulk1
    • collections1
    • drosophila1
    • microgalaxy1
    • rna-seq1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner2
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bérénice Batut2
    • Anika Erxleben1
    • Clemens Blank1
    • Engy Nasr1
    • Jörg Wennmann1
    • Lucille Delisle1
    • Mallory Freeberg1
    • Maria Doyle1
    • Mo Heydarian1
    • Nicola Soranzo1
    • Paul Zierep1
    • Pavankumar Videm1
    • Peter van Heusden1
    • Show N_FILTERS more
    • Contributor
    • Wolfgang Maier
    • Björn Grüning8
    • Saskia Hiltemann8
    • Helena Rasche6
    • Bérénice Batut4
    • Nicola Soranzo3
    • Cristóbal Gallardo2
    • Hans-Rudolf Hotz2
    • Marius van den Beek2
    • Martin Čech2
    • Wendi Bacon2
    • Alex Ostrovsky1
    • Amirhossein Naghsh Nilchi1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Anthony Bretaudeau1
    • Armin Dadras1
    • Aysam Guerler1
    • Carlos Chee Mendonça1
    • Clea Siguret1
    • Clemens Blank1
    • David López1
    • Deepti Varshney1
    • Ekaterina Polkh1
    • Engy Nasr1
    • Graeme Tyson1
    • Jennifer Hillman-Jackson1
    • John Chilton1
    • Jörg Wennmann1
    • Lucille Delisle1
    • Maria Doyle1
    • Matthias Bernt1
    • Mehmet Tekman1
    • Melanie Föll1
    • Michele Maroni1
    • Morgan Howells1
    • Mélanie Petera1
    • Nadia Goué1
    • Nate Coraor1
    • Niall Beard1
    • Paul Zierep1
    • Pavankumar Videm1
    • Peter-Bram 't Hoen1
    • Simon Bray1
    • William Durand1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows3
    • Associated Training Datasets2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Contributors: Wolfgang Maier

and Resource type: e-learning

and Tools: ggplot2

3 e-learning materials found
  • e-learning

    Deciphering Virus Populations - Single Nucleotide Variants (SNVs) and Specificities in Baculovirus Isolates

    •• intermediate
    Genetic variation Variant Analysis
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Reference-based RNA-Seq data analysis

    • beginner
    Transcriptomics QC bulk collections cyoa drosophila rna-seq
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.