Training materials
-
e-learning
Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
• beginnerClimate interactive-tools -
slides
The Pangeo ecosystem
• beginnerClimate climate -
slides
Pangeo ecosystem 101 for everyone
• beginnerClimate climate -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
e-learning
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
e-learning
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
e-learning
Reference-based RNAseq data analysis (long)
• beginnerTranscriptomics -
e-learning
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
e-learning
GO Enrichment Analysis
• beginnerTranscriptomics