Materials - TeSS Sandbox (Training eSupport System)

Training materials

Register training material

Tools: Minimap2

and Difficulty level: Beginner

and Related resources: Associated Workflows

4 materials found

e-learning

Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data

• beginner
Metagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome
e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
e-learning

Large genome assembly and polishing

• beginner
Sequence assembly Assembly assembly nanopore plants polishing
e-learning

ERGA post-assembly QC

• beginner
Sequence assembly Assembly QC animals assembly genome plants