TeSS Sandbox (Training eSupport System)

Training materials

Difficulty level: Beginner

and Keywords: jupyter-notebook

and Target audience: Students

28 materials found

e-learning

Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)

• beginner
10x MIGHTS Python Single Cell jupyter-notebook paper-replication
e-learning

Generating a single cell matrix using Alevin and combining datasets (bash + R)

• beginner
10x MIGHTS Single Cell jupyter-notebook paper-replication
e-learning

Inferring single cell trajectories with Monocle3 (R)

• beginner
10x MIGHTS R Single Cell jupyter-notebook paper-replication rmarkdown-notebook
e-learning

Filter, plot, and explore single cell RNA-seq data with Seurat (R)

• beginner
10x MIGHTS R Single Cell jupyter-notebook paper-replication rmarkdown-notebook
e-learning

Inferring single cell trajectories with Scanpy (Python)

• beginner
10x MIGHTS Python Single Cell jupyter-notebook paper-replication
e-learning

Pangeo Notebook in Galaxy - Introduction to Xarray

• beginner
Climate interactive-tools jupyter-notebook pangeo
e-learning

Introduction to sequencing with Python (part one)

• beginner
Software engineering Foundations of Data Science jupyter-notebook
e-learning

Data visualisation Olympics - Visualization in R

• beginner
Software engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook
e-learning

Introduction to sequencing with Python (part two)

• beginner
Software engineering Foundations of Data Science jupyter-notebook
e-learning

Introduction to sequencing with Python (part three)

• beginner
Software engineering Foundations of Data Science jupyter-notebook

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Training materials

Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)

Generating a single cell matrix using Alevin and combining datasets (bash + R)

Inferring single cell trajectories with Monocle3 (R)

Filter, plot, and explore single cell RNA-seq data with Seurat (R)

Inferring single cell trajectories with Scanpy (Python)

Pangeo Notebook in Galaxy - Introduction to Xarray

Introduction to sequencing with Python (part one)

Data visualisation Olympics - Visualization in R

Introduction to sequencing with Python (part two)

Introduction to sequencing with Python (part three)