Training materials
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e-learning
Preparing genomic data for phylogeny reconstruction
• beginnerEcology data handling functional annotation phylogeny -
e-learning
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• beginnerEcology Biodiversity Data Paper EML FAIR Metadata -
e-learning
Cleaning GBIF data for the use in Ecology
• beginnerEcology data cleaning data management gbif -
e-learning
Metabarcoding/eDNA through Obitools
• beginnerEcology Community composition EBV class EBV dataset EBV workflow Genetic composition EBV class Metabarcoding eDNA -
e-learning
Biodiversity data exploration
• beginnerEcology data quality taxonomic data -
e-learning
Compute and analyze biodiversity metrics with PAMPA toolsuite
• beginnerEcology Community composition EBV class EBV dataset EBV workflow Species population EBV class modeling -
e-learning
RAD-Seq de-novo data analysis
• beginnerEcology EBV dataset EBV workflow Genetic composition EBV class RAD-seq Species populations EBV class -
e-learning
Sentinel 2 biodiversity
• beginnerEcology Remote sensing -
e-learning
Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
• beginnerSingle Cell data management transcriptomics -
e-learning
Converting between common single cell data formats
• beginnerSingle Cell data import data management