Training materials
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e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
e-learning
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod illumina jbrowse1 microgalaxy -
e-learning
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
Recorded webinar
Understanding InterPro families, domains and functions
Proteins Gene and protein families
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Recorded webinar
InterProScan
Gene and protein families Function analysis
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e-learning
Pfam: Quick tour
Gene and protein families Protein families Multiple sequence alignments Profile Hidden Markov models HMMs
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e-learning
Protein classification: An introduction to EMBL-EBI resources
Proteins Gene and protein families Protein classification Protein families Protein domains Protein signatures
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e-learning
InterPro: A case study of 3 protein family building methodologies
Gene and protein families Protein families Structure Function Linkage Database SFLD TIGRFAMs PANTHER
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e-learning
InterPro: Quick tour
Proteins Gene and protein families Protein sequences Protein classification Protein families