Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly2
    • Sequence assembly2
    • Antimicrobial stewardship1
    • Biological sequences1
    • Community analysis1
    • Disease1
    • Environmental microbiology1
    • Epidemiology1
    • Exomes1
    • Genome annotation1
    • Genomes1
    • Genomics1
    • Medical microbiology1
    • Metagenomics1
    • Microbial ecology1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Microbiome1
    • Molecular community analysis1
    • Molecular infection biology1
    • Molecular microbiology1
    • Pathology1
    • Personal genomics1
    • Public health1
    • Public health and epidemiology1
    • Sequence analysis1
    • Sequence databases1
    • Shotgun metagenomics1
    • Synthetic genomics1
    • Taxonomy1
    • Viral genomics1
    • Whole genomes1
    • Show N_FILTERS more
    • Tool
    • BEDTools
    • Galaxy37
    • FastQC9
    • taxonomy_krona_chart8
    • fastp7
    • kraken27
    • JBrowse5
    • Bandage4
    • MetaPhlAn4
    • MultiQC4
    • BCFtools3
    • BamTools3
    • Bracken3
    • Cutadapt3
    • HUMAnN23
    • KrakenTools3
    • NanoPlot3
    • Newick Utilities3
    • QUAST3
    • SAMtools3
    • mothur3
    • snippy3
    • Bakta2
    • Bowtie 22
    • COMBAT-TB Workbench2
    • CheckM2
    • Falco2
    • FastTree2
    • Flye2
    • GraPhlAn2
    • MEGAHIT2
    • Recentrifuge2
    • SortMeRNA2
    • Unicycler2
    • Unipept2
    • export2graphlan2
    • humann2
    • metaQuantome2
    • staramr2
    • tb-profiler2
    • tbl2gff32
    • ABRicate1
    • Apollo1
    • BWA1
    • Bowtie1
    • Bwa-mem21
    • Circos1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • DeepTools1
    • Diamond1
    • Filtlong1
    • FlashLFQ1
    • FreeBayes1
    • Galactic Circos1
    • ISEScan1
    • Integron Finder1
    • Jvarkit1
    • Krona1
    • MAFFT1
    • MLST1
    • Medaka1
    • Minimap21
    • NCBI Datasets1
    • NGSUtils1
    • PlasmidFinder1
    • Polypolish1
    • QualiMap1
    • RAxML1
    • Racon1
    • RapidNJ1
    • TRANSIT1
    • Trimmomatic1
    • Vcflib1
    • bx-python1
    • compute_sequence_length1
    • dRep1
    • dada21
    • ggplot21
    • metaspades1
    • miniasm1
    • msConvert1
    • orfipy1
    • phyloseq1
    • seqtk1
    • shovill1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training2
    • Show N_FILTERS more
    • Keyword
    • microgalaxy
    • Epigenetics4
    • Transcriptomics3
    • Assembly2
    • ChIP-seq2
    • biodiversity2
    • eukaryote2
    • 10x1
    • Genome Annotation1
    • Heatmap1
    • Introduction to Galaxy Analyses1
    • Microbiome1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • Single Cell1
    • VGP1
    • cyoa1
    • epigenetics1
    • gmod1
    • jbrowse11
    • pacbio1
    • prokaryote1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International2
    • Show N_FILTERS more
    • Target audience
    • Students2
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko1
    • Bérénice Batut1
    • Delphine Lariviere1
    • Engy Nasr1
    • Helena Rasche1
    • Paul Zierep1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning2
    • Bérénice Batut2
    • Helena Rasche2
    • Saskia Hiltemann2
    • Anthony Bretaudeau1
    • Anton Nekrutenko1
    • Cristóbal Gallardo1
    • Deepti Varshney1
    • Engy Nasr1
    • Hans-Rudolf Hotz1
    • Maria Doyle1
    • Niall Beard1
    • Nicola Soranzo1
    • Paul Zierep1
    • Wolfgang Maier1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets2
    • Associated Workflows2
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Tools: BEDTools

and Keywords: microgalaxy

and Resource type: e-learning

2 e-learning materials found
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    Making sense of a newly assembled genome

    • beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.