Materials - TeSS Sandbox (Training eSupport System)

Training materials

Register training material

Tools: Galaxy

and Content provider: Galaxy Training

and Authors: Anton Nekrutenko

13 materials found

e-learning

Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data

•• intermediate
Sequence assembly Assembly VGP eukaryote pacbio
e-learning

Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

•• intermediate
Sequence assembly Assembly VGP eukaryote pacbio
e-learning

Comparative gene analysis in unannotated genomes

• beginner
Genomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy …
e-learning

Making sense of a newly assembled genome

• beginner
Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
e-learning

Calling variants in non-diploid systems

• beginner
Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
e-learning

From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis

• beginner
Genetic variation Variant Analysis covid19 one-health virology
e-learning

Using dataset collections

•• intermediate
Using Galaxy and Managing your Data collections
e-learning

Unicycler Assembly

• beginner
Sequence assembly Genomics Microbiology Assembly microgalaxy prokaryote
e-learning

Very Short Introductions: QC

• beginner
Introduction to Galaxy Analyses
e-learning

NGS data logistics

• beginner
Introduction to Galaxy Analyses

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