Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Exomes3
    • Genome annotation3
    • Genomes3
    • Genomics3
    • Personal genomics3
    • Synthetic genomics3
    • Viral genomics3
    • Whole genomes3
    • Antimicrobial stewardship2
    • Assembly2
    • Biological sequences2
    • Medical microbiology2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Sequence analysis2
    • Sequence assembly2
    • Sequence databases2
    • Comparative transcriptomics1
    • DNA variation1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Genetic linkage1
    • Genetic variation1
    • Genomic variation1
    • Linkage1
    • Linkage mapping1
    • Mapping1
    • Mutation1
    • Polymorphism1
    • Protein families1
    • Protein sequence classification1
    • Somatic mutations1
    • Synteny1
    • Transcriptome1
    • Transcriptomics1
    • Show N_FILTERS more
    • Tool
    • Galaxy
    • Galactic Circos4
    • JBrowse3
    • RStudio3
    • Apollo2
    • BEDTools2
    • Circos2
    • FastQC2
    • BCFtools1
    • BamTools1
    • Cutadapt1
    • DeepTools1
    • EGA1
    • FASTX-Toolkit1
    • FeatureCounts1
    • GEMINI1
    • GOseq1
    • HISAT21
    • MultiQC1
    • RSeQC1
    • SAMtools1
    • SPAdes1
    • SRA Software Toolkit1
    • VelvetOptimiser1
    • annotatemyids1
    • bx-python1
    • compute_sequence_length1
    • limma1
    • seqtk1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training18
    • Show N_FILTERS more
    • Keyword
    • Visualisation5
    • Introduction to Galaxy Analyses3
    • gmod3
    • jbrowse13
    • prokaryote3
    • Assembly2
    • Contributing to the Galaxy Training Material2
    • Genome Annotation2
    • cyoa2
    • microgalaxy2
    • Sequence analysis1
    • Transcriptomics1
    • Using Galaxy and Managing your Data1
    • Variant Analysis1
    • apollo21
    • biodiversity1
    • bulk1
    • rna-seq1
    • viz1
    • workflows1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner11
    • Intermediate6
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International18
    • Show N_FILTERS more
    • Target audience
    • Students16
    • Instructors2
    • Show N_FILTERS more
    • Author
    • Helena Rasche
    • Bérénice Batut46
    • Subina Mehta24
    • Saskia Hiltemann23
    • Yvan Le Bras20
    • Anthony Bretaudeau16
    • Anne Fouilloux13
    • Anton Nekrutenko13
    • James Johnson13
    • Katherine Do13
    • Marie Josse13
    • Wolfgang Maier13
    • Maria Doyle12
    • Mehmet Tekman12
    • Anup Kumar11
    • Cristóbal Gallardo11
    • Pratik Jagtap11
    • Björn Grüning10
    • Delphine Lariviere10
    • Melanie Föll10
    • Pavankumar Videm10
    • Wendi Bacon10
    • Simon Bray9
    • Simon Gladman8
    • Timothy J. Griffin8
    • Daniel Blankenberg7
    • Erwan Corre7
    • Julia Jakiela7
    • Kaivan Kamali7
    • Matthias Fahrner7
    • Nicola Soranzo7
    • Praveen Kumar7
    • Stéphanie Robin7
    • Alexandre Cormier6
    • Anika Erxleben6
    • Anna Syme6
    • Coline Royaux6
    • Dave Clements6
    • Emma Leith6
    • Laura Leroi6
    • Valentin Loux6
    • Alex Ostrovsky5
    • Beatriz Serrano-Solano5
    • Dechen Bhuming5
    • Florian Christoph Sigloch5
    • Fotis E. Psomopoulos5
    • Joachim Wolff5
    • Katarzyna Kamieniecka5
    • Krzysztof Poterlowicz5
    • Leonid Kostrykin5
    • Lucille Delisle5
    • Paul Zierep5
    • Ray Sajulga5
    • Alireza Khanteymoori4
    • Clemens Blank4
    • Diana Chiang Jurado4
    • Florian Heyl4
    • Helge Hecht4
    • Hélène Chiapello4
    • Khaled Jum'ah4
    • Mallory Freeberg4
    • Marius van den Beek4
    • Mélanie Petera4
    • Nadia Goué4
    • Riccardo Massei4
    • Vivek Bhardwaj4
    • Bazante Sanders3
    • Belinda Phipson3
    • Christopher Barnett3
    • Engy Nasr3
    • Fidel Ramirez3
    • Gildas Le Corguillé3
    • Jean-François Martin3
    • Marie Crane3
    • Marisa Loach3
    • Miguel Roncoroni3
    • Mo Heydarian3
    • Morgan Howells3
    • Toby Hodges3
    • Workflow4Metabolomics core team3
    • Anne Pajon2
    • Brandon Pickett2
    • Chao Zhang2
    • Christoph Stritt2
    • Clea Siguret2
    • Daniela Brites2
    • David Christiany2
    • Deepti Varshney2
    • Ekaterina Polkh2
    • Elisa Michon2
    • Esteban Perez-Wohlfeil2
    • Fabio Cumbo2
    • Florence Combes2
    • Friederike Dündar2
    • Galo A. Goig2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Jayadev Joshi2
    • Jean-Karim Hériché2
    • Jon Trow2
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann18
    • Björn Grüning17
    • Helena Rasche17
    • Anthony Bretaudeau10
    • Bérénice Batut10
    • Nicola Soranzo8
    • Niall Beard7
    • Maria Doyle5
    • William Durand5
    • Cristóbal Gallardo4
    • Gildas Le Corguillé4
    • Simon Bray4
    • Armin Dadras3
    • David López3
    • Mehmet Tekman3
    • Nate Coraor3
    • Simon Gladman3
    • Teresa Müller3
    • Wendi Bacon3
    • Wolfgang Maier3
    • Anton Nekrutenko2
    • Dave Clements2
    • Linelle Abueg2
    • Lucille Delisle2
    • Martin Čech2
    • Stéphanie Robin2
    • Andrea Bagnacani1
    • Beatriz Serrano-Solano1
    • Bert Droesbeke1
    • Clemens Blank1
    • Cyril Monjeaud1
    • Ekaterina Polkh1
    • Hans-Rudolf Hotz1
    • Jasper Ouwerkerk1
    • José Manuel Domínguez1
    • Julia Jakiela1
    • Marisa Loach1
    • Marius van den Beek1
    • Matthias Bernt1
    • Matti Hoch1
    • Melissa Burke1
    • Mira Kuntz1
    • Pablo Moreno1
    • Pavankumar Videm1
    • Sanjay Kumar Srikakulam1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Resource type
    • e-learning14
    • slides4
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets15
    • Associated Workflows15
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: Galaxy

and Authors: Helena Rasche

18 materials found
  • e-learning

    Using Workflow Parameters

    •• intermediate
    Using Galaxy and Managing your Data workflows
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• intermediate
    Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    Genomic Data Visualisation with JBrowse

    •• intermediate
    Visualisation gmod jbrowse1
  • e-learning

    Refining Genome Annotations with Apollo (prokaryotes)

    •• intermediate
    Genomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 biodiversity gmod jbrowse1 microgalaxy …
  • e-learning

    Making sense of a newly assembled genome

    • beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
  • e-learning

    Trio Analysis using Synthetic Datasets from RD-Connect GPAP

    ••• advanced
    Genetic variation Variant Analysis cyoa
  • slides

    Refining Genome Annotations with Apollo

    • beginner
    Genomics Genome Annotation prokaryote
  • e-learning

    Creating content in Markdown

    • beginner
    Contributing to the Galaxy Training Material
  • e-learning

    Creating a new tutorial

    • beginner
    Contributing to the Galaxy Training Material
  • e-learning

    Visualisation with Circos

    •• intermediate
    Visualisation
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.