Filter

• Sort

• • Most recent Last modified Title descending Title ascending

• Filter Clear filters

• • Scientific topic
  • Biological sequences28
  • Sequence analysis28
  • Sequence databases28
  • Bottom-up proteomics26
  • Comparative transcriptomics26
  • Discovery proteomics26
  • MS-based targeted proteomics26
  • MS-based untargeted proteomics26
  • Metaproteomics26
  • Peptide identification26
  • Protein and peptide identification26
  • Proteomics26
  • Quantitative proteomics26
  • Targeted proteomics26
  • Top-down proteomics26
  • Transcriptome26
  • Transcriptomics26
  • Assembly22
  • Sequence assembly22
  • Bayesian methods20
  • Biostatistics20
  • Descriptive statistics20
  • Gaussian processes20
  • Inferential statistics20
  • Markov processes20
  • Multivariate statistics20
  • Probabilistic graphical model20
  • Probability20
  • Statistics20
  • Statistics and probability20
  • Community analysis19
  • Environmental microbiology19
  • Microbial ecology19
  • Microbiome19
  • Molecular community analysis19
  • Metagenomics18
  • Shotgun metagenomics18
  • Antimicrobial stewardship17
  • Exomes17
  • Genome annotation17
  • Genomes17
  • Genomics17
  • Medical microbiology17
  • Microbial genetics17
  • Microbial physiology17
  • Microbial surveillance17
  • Microbiological surveillance17
  • Microbiology17
  • Molecular infection biology17
  • Molecular microbiology17
  • Personal genomics17
  • Synthetic genomics17
  • Viral genomics17
  • Whole genomes17
  • Algorithms13
  • Computer programming13
  • Data structures13
  • Programming languages13
  • Software development13
  • Software engineering13
  • Taxonomy13
  • Computational ecology12
  • DNA variation12
  • Ecoinformatics12
  • Ecological informatics12
  • Ecology12
  • Ecosystem science12
  • Genetic variation12
  • Genomic variation12
  • Mutation12
  • Polymorphism12
  • Somatic mutations12
  • Epigenomics11
  • Evolution9
  • Evolutionary biology9
  • Exometabolomics9
  • LC-MS-based metabolomics9
  • MS-based metabolomics9
  • MS-based targeted metabolomics9
  • MS-based untargeted metabolomics9
  • Mass spectrometry-based metabolomics9
  • Metabolites9
  • Metabolome9
  • Metabolomics9
  • Metabonomics9
  • NMR-based metabolomics9
  • Diffraction experiment8
  • Imaging8
  • Microscopy8
  • Microscopy imaging8
  • Optical super resolution microscopy8
  • Photonic force microscopy8
  • Photonic microscopy8
  • Computational chemistry7
  • De novo genome sequencing6
  • Epidemiology6
  • Genome sequencing6
  • Public health6
  • Public health and epidemiology6
  • WGS6
  • Show N_FILTERS more
• • Tool
  • Galaxy234
  • FastQC33
  • SAMtools21
  • MultiQC17
  • BEDTools16
  • scikit-learn14
  • Cutadapt13
  • BWA12
  • DeepTools12
  • JBrowse12
  • fastp12
  • SCANPY11
  • QUAST10
  • GEMINI9
  • taxonomy_krona_chart9
  • BLAST8
  • NanoPlot8
  • STAR8
  • kraken28
  • BUSCO7
  • FreeBayes7
  • Trimmomatic7
  • Workflow4Metabolomics6
  • msConvert6
  • BCFtools5
  • Bandage5
  • Bowtie 25
  • Flye5
  • Galactic Circos5
  • HISAT25
  • MaxQuant5
  • MetaPhlAn5
  • RSeQC5
  • xcms5
  • BamTools4
  • Biopython4
  • HUMAnN24
  • KrakenTools4
  • MACS4
  • MSstats4
  • Newick Utilities4
  • Open Babel4
  • gffread4
  • ggplot24
  • mothur4
  • Apollo3
  • Bracken3
  • Cardinal3
  • Clustal 1.8 (Clustal W, Clustal X)3
  • Diamond3
  • DropletUtils3
  • FASTX-Toolkit3
  • GOseq3
  • Galaxy Image Analysis3
  • GraPhlAn3
  • Merqury3
  • Minimap23
  • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC3
  • RStudio3
  • SeqCode3
  • SortMeRNA3
  • Stacks3
  • UniProt3
  • Unicycler3
  • Unipept3
  • annotatemyids3
  • export2graphlan3
  • gffcompare3
  • humann3
  • pyGenomeTracks3
  • scikit-image3
  • seqtk3
  • snippy3
  • Bakta2
  • Bio3D2
  • Bwa-mem22
  • COMBAT-TB Workbench2
  • ChIPpeakAnno2
  • Circos2
  • European Nucleotide Archive (ENA)2
  • FastTree2
  • FeatureCounts2
  • GECKO2
  • GOEnrichment2
  • GenomeScope 2.02
  • Gromacs2
  • Heinz2
  • InterProScan (EBI)2
  • IsoformSwitchAnalyzeR2
  • MAFFT2
  • MAGeCK2
  • MDAnalysis2
  • MEGAHIT2
  • MEME2
  • Medaka2
  • PfamScan2
  • RDKit2
  • Racon2
  • Recentrifuge2
  • RepeatMasker2
  • Show N_FILTERS more
• • Content provider
  • Galaxy Training
  • Show N_FILTERS more
• • Keyword
  • microgalaxy34
  • Single Cell30
  • Proteomics26
  • Transcriptomics26
  • Galaxy Server administration23
  • Genome Annotation22
  • Statistics and machine learning20
  • Assembly17
  • 10x15
  • Microbiome15
  • Using Galaxy and Managing your Data15
  • fair14
  • gmod14
  • jbrowse114
  • prokaryote13
  • Ecology12
  • FAIR Data, Workflows, and Research12
  • Variant Analysis12
  • Epigenetics11
  • paper-replication11
  • Introduction to Galaxy Analyses10
  • MIGHTS10
  • data stewardship10
  • eukaryote10
  • Evolution9
  • Foundations of Data Science9
  • Metabolomics9
  • Sequence analysis9
  • ansible9
  • cyoa9
  • git-gat9
  • interactive-tools9
  • jupyter-notebook9
  • Climate8
  • Imaging8
  • plants8
  • Computational chemistry7
  • DDA7
  • assembly7
  • dmp7
  • EBV dataset6
  • EBV workflow6
  • collections6
  • nanopore6
  • Visualisation5
  • data management5
  • illumina5
  • label-TMT115
  • metagenomics5
  • one-health5
  • work-in-progress5
  • 16S4
  • DIA4
  • Genetic composition EBV class4
  • HeLa4
  • bacteria4
  • covid194
  • metabarcoding4
  • mouse4
  • ChIP-seq3
  • FAIR3
  • QC3
  • R3
  • RAD-seq3
  • amr3
  • apollo23
  • bioimaging3
  • metatranscriptomics3
  • open3
  • pacbio3
  • pangeo3
  • proteogenomics3
  • rmarkdown-notebook3
  • transcriptomics3
  • Community composition EBV class2
  • Contributing to the Galaxy Training Material2
  • Data Paper2
  • Development in Galaxy2
  • EML2
  • Metadata2
  • Python2
  • Species population EBV class2
  • Species populations EBV class2
  • Synthetic Biology2
  • VGP2
  • bulk2
  • climate2
  • data import2
  • deep-learning2
  • epigenetics2
  • essential genes2
  • evolution2
  • human2
  • jobs2
  • jupyter-lab2
  • machine-learning2
  • maker2
  • monitoring2
  • networking2
  • phylogenetics2
  • Show N_FILTERS more
• • Difficulty level
  • Beginner264
  • Intermediate50
  • Advanced9
  • Show N_FILTERS more
• • Licence
  • Creative Commons Attribution 4.0 International323
  • Show N_FILTERS more
• • Target audience
  • Students296
  • Galaxy Administrators25
  • Instructors2
  • Show N_FILTERS more
• • Author
  • Helena Rasche40
  • Bérénice Batut36
  • Saskia Hiltemann27
  • Anthony Bretaudeau20
  • Björn Grüning17
  • Katarzyna Kamieniecka17
  • Krzysztof Poterlowicz17
  • Anton Nekrutenko16
  • Subina Mehta16
  • Mehmet Tekman14
  • Maria Doyle13
  • Nicola Soranzo13
  • Simon Gladman12
  • Wendi Bacon12
  • Pratik Jagtap11
  • Anne Fouilloux10
  • Khaled Jum'ah10
  • Yvan Le Bras10
  • Anup Kumar9
  • Cristóbal Gallardo9
  • Julia Jakiela9
  • Melanie Föll9
  • Pavankumar Videm9
  • Simon Bray9
  • Delphine Lariviere8
  • Timothy J. Griffin8
  • Alex Ostrovsky7
  • Anika Erxleben7
  • Erwan Corre7
  • Kaivan Kamali7
  • Laura Cooper7
  • Michael Charleston7
  • Praveen Kumar7
  • Robert Andrews7
  • Stéphanie Robin7
  • Wolfgang Maier7
  • Alexandre Cormier6
  • Andrew Mason6
  • Anna Syme6
  • Anne Pajon6
  • Branka Franicevic6
  • Dave Clements6
  • Emma Leith6
  • Joachim Wolff6
  • Laura Leroi6
  • Lucille Delisle6
  • Matthias Fahrner6
  • Paul Zierep6
  • Philippe Rocca-Serra6
  • Sara Morsy6
  • Xenia Perez Sitja6
  • Christopher Barnett5
  • Dechen Bhuming5
  • Florian Christoph Sigloch5
  • James Johnson5
  • Katherine Do5
  • Kellie Snow5
  • Korneel Hens5
  • Munazah Andrabi5
  • Nick Juty5
  • Ray Sajulga5
  • Saskia Lawson-Tovey5
  • Alireza Khanteymoori4
  • Bazante Sanders4
  • Clemens Blank4
  • Coline Royaux4
  • Daniel Blankenberg4
  • Engy Nasr4
  • Florian Heyl4
  • Fotis E. Psomopoulos4
  • Mallory Freeberg4
  • Marius van den Beek4
  • Mateo Boudet4
  • Mélanie Petera4
  • Nate Coraor4
  • Vivek Bhardwaj4
  • Beatriz Serrano-Solano3
  • Belinda Phipson3
  • Fidel Ramirez3
  • Gildas Le Corguillé3
  • Hans-Rudolf Hotz3
  • Jean-François Martin3
  • Leonid Kostrykin3
  • Lisanna Paladin3
  • Marie Crane3
  • Miguel Roncoroni3
  • Mira Kuntz3
  • Mo Heydarian3
  • Morgan Howells3
  • Nadia Goué3
  • Tharindu Senapathi3
  • The Carpentries3
  • Workflow4Metabolomics core team3
  • Anne Siegel2
  • Brandon Pickett2
  • Cameron Hyde2
  • Camila Goclowski2
  • Chao Zhang2
  • Christoph Stritt2
  • Cristina Martins Rodrigues2
  • Show N_FILTERS more
• • Contributor
  • Saskia Hiltemann297
  • Helena Rasche286
  • Björn Grüning215
  • Bérénice Batut137
  • Nicola Soranzo83
  • Cristóbal Gallardo60
  • Anthony Bretaudeau59
  • Niall Beard51
  • Gildas Le Corguillé35
  • Mehmet Tekman34
  • William Durand33
  • Nate Coraor32
  • Martin Čech29
  • Melanie Föll27
  • Wendi Bacon26
  • Lucille Delisle25
  • Pavankumar Videm24
  • Teresa Müller24
  • Marius van den Beek23
  • Maria Doyle21
  • Simon Bray20
  • Simon Gladman19
  • Subina Mehta19
  • Yvan Le Bras17
  • Anup Kumar15
  • Khaled Jum'ah15
  • Wolfgang Maier15
  • Anne Fouilloux14
  • Deepti Varshney14
  • Julia Jakiela14
  • Beatriz Serrano-Solano12
  • Matthias Bernt11
  • Mélanie Petera11
  • Anton Nekrutenko10
  • Katarzyna Kamieniecka9
  • Stéphanie Robin9
  • Pablo Moreno8
  • David López7
  • Kaivan Kamali7
  • Mallory Freeberg7
  • Marisa Loach7
  • Melissa Burke7
  • Alexandre Cormier6
  • Anna Syme6
  • Dave Clements6
  • Delphine Lariviere6
  • Hans-Rudolf Hotz6
  • Mira Kuntz6
  • Paul Zierep6
  • Alireza Khanteymoori5
  • Bert Droesbeke5
  • Christopher Barnett5
  • Clemens Blank5
  • Ekaterina Polkh5
  • Florian Christoph Sigloch5
  • Florian Heyl5
  • Gianmauro Cuccuru5
  • Linelle Abueg5
  • Peter van Heusden5
  • Pratik Jagtap5
  • Timothy J. Griffin5
  • Clea Siguret4
  • Donny Vrins4
  • Alex Ostrovsky3
  • Bazante Sanders3
  • Coline Royaux3
  • Fabio Cumbo3
  • Joachim Wolff3
  • Krzysztof Poterlowicz3
  • Leonid Kostrykin3
  • Mateo Boudet3
  • Miaomiao Zhou3
  • Xavier Garnier3
  • Ahmed Hamid Awan2
  • Amirhossein Naghsh Nilchi2
  • Anika Erxleben2
  • Camila Goclowski2
  • Catherine Bromhead2
  • Christoph Stritt2
  • CicoZhang2
  • Engy Nasr2
  • Enis Afgan2
  • Esteban Perez-Wohlfeil2
  • Fidel Ramirez2
  • Graeme Tyson2
  • Jasper Ouwerkerk2
  • Jennifer Hillman-Jackson2
  • Jonathan Kreplak2
  • Kenza Bazi-Kabbaj2
  • Laura Leroi2
  • Leily Rabbani2
  • Maria Christina Maniou2
  • Nadia Goué2
  • Natalie Kucher2
  • Romane LIBOUBAN2
  • Swathi Nataraj2
  • Thomas Wollmann2
  • Timon Schlegel2
  • Vijay2
  • Willem de Koning2
  • Show N_FILTERS more
• • Resource type
  • e-learning281
  • slides42
  • Show N_FILTERS more
• • Related resource
  • Associated Training Datasets
  • Associated Workflows247
  • Quarto/RMarkdown Notebook185
  • Jupyter Notebook (with Solutions)41
  • Jupyter Notebook (without Solutions)41
  • Input datasets32
  • ansible19
  • git-gat18
  • Associated slides9
  • Proteomics dataset5
  • Sequence analysis dataset5
  • Transcriptomics dataset5
  • jobs5
  • Assembly dataset4
  • Variant Analysis dataset4
  • Assembly slides3
  • Development in Galaxy slides3
  • deploying3
  • monitoring3
  • ro-crate3
  • ChIP-Seq data analysis dataset2
  • Epigenetics dataset2
  • Genome Annotation dataset2
  • Metagenomics dataset2
  • Sequence analysis slides2
  • collections2
  • cyoa2
  • kubernetes2
  • networking2
  • storage2
  • training2
  • wireguard2
  • workflows2
  • Community1
  • Contributing to the Galaxy Training Material slides1
  • DDA1
  • ENA1
  • FAIR1
  • Galaxy Server administration slides1
  • Genome Annotation slides1
  • Introduction to Galaxy Analyses dataset1
  • Introduction to Galaxy dataset1
  • SIG1
  • Statistics dataset1
  • Transcriptomics slides1
  • User Interface and Features dataset1
  • apollo21
  • authentication1
  • automation1
  • beacon1
  • broken1
  • cloud1
  • data1
  • fair1
  • features1
  • ga4gh1
  • gmod1
  • gtn1
  • interactive-tools1
  • systemd1
  • tags1
  • terraform1
  • tools1
  • work-in-progress1
  • Show N_FILTERS more
• Show disabled materials
• Show archived materials
• • Date added
  • In the last 24 hours
  • In the last 1 week
  • In the last 1 month