Training materials
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e-learning
Inferring single cell trajectories with Monocle3 (R)
• beginner10x MIGHTS R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x MIGHTS R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Bulk RNA Deconvolution with MuSiC
• beginnerSingle Cell transcriptomics -
e-learning
Comparing inferred cell compositions using MuSiC deconvolution
• beginnerSingle Cell transcriptomics -
e-learning
Inferring single cell trajectories with Monocle3
• beginner10x MIGHTS Single Cell paper-replication -
e-learning
Clinical Metaproteomics 5: Data Interpretation
• beginnerMetagenomics Microbial ecology Microbiome label-TMT11 -
e-learning
Clinical Metaproteomics 4: Quantitation
• beginnerMetagenomics Microbial ecology Microbiome label-TMT11 -
e-learning
Clinical Metaproteomics 3: Verification
• beginnerMetagenomics Microbial ecology Microbiome label-TMT11 -
e-learning
Genomic Data Visualisation with JBrowse
•• intermediateVisualisation gmod jbrowse1