Materials - TeSS Sandbox (Training eSupport System)

Training materials

Register training material

Scientific topics: Sequence assembly

and Difficulty level: Beginner

and Contributors: Anthony Bretaudeau

8 materials found

e-learning

Making sense of a newly assembled genome

• beginner
Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
e-learning

Chloroplast genome assembly

• beginner
Sequence assembly Assembly jbrowse1 nanopore plants
e-learning

Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

• beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
e-learning

Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

• beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
e-learning

Microbial Variant Calling

• beginner
Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy …
e-learning

Unicycler Assembly

• beginner
Sequence assembly Genomics Microbiology Assembly microgalaxy prokaryote
slides

An introduction to get started in genome assembly and annotation

• beginner
Sequence assembly Assembly
slides

Genome assembly quality control.

• beginner
Sequence assembly Assembly