Training materials
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e-learning
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy … -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
16S Microbial analysis with Nanopore data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy nanopore … -
e-learning
Rule Based Uploader
•• intermediateUsing Galaxy and Managing your Data collections tags -
e-learning
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
slides
The Pangeo ecosystem
• beginnerClimate climate -
slides
Pangeo ecosystem 101 for everyone
• beginnerClimate climate -
e-learning
Creating content in Markdown
• beginnerContributing to the Galaxy Training Material -
e-learning
Assessment and feedback in training and teachings
• beginnerTeaching and Hosting Galaxy training