Training materials
Licence: Creative Commons Attribution 4.0 International
and Tools: BEDTools
and Contributors: Saskia Hiltemann
15 materials found
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e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
e-learning
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
• beginnerEpigenomics ChIP-seq Epigenetics -
e-learning
Formation of the Super-Structures on the Inactive X
• beginnerEpigenomics ChIP-seq Epigenetics -
e-learning
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
e-learning
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
e-learning
Differential abundance testing of small RNAs
• beginnerTranscriptomics -
e-learning
CLIP-Seq data analysis from pre-processing to motif detection
• beginnerTranscriptomics -
e-learning
De novo transcriptome reconstruction with RNA-Seq
• beginnerTranscriptomics
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