Training materials
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e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
e-learning
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
e-learning
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy … -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
e-learning
Genome Annotation
• beginnerGenome Annotation prokaryote work-in-progress -
e-learning
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore plants polishing -
e-learning
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote