Training materials
Contributors: Anthony Bretaudeau
and Related resources: Associated Training Datasets
59 materials found
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e-learning
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
e-learning
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
e-learning
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
e-learning
De novo transcriptome reconstruction with RNA-Seq
• beginnerTranscriptomics -
e-learning
RNA-Seq analysis with AskOmics Interactive Tool
• beginnerTranscriptomics -
e-learning
Visualisation with Circos
•• intermediateVisualisation -
e-learning
Downstream Single-cell RNA analysis with RaceID
• beginnerSingle Cell -
e-learning
Single-cell quality control with scater
• beginnerSingle Cell