Training materials
Contributors: Bérénice Batut
and Related resources: Associated Training Datasets
145 materials found
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e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1 -
e-learning
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod … -
e-learning
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Comparative genomics Genome Annotation annotation biodiversity cookbook eukaryote … -
e-learning
Genome annotation with Maker
••• advancedGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Creating an Official Gene Set
• beginnerGenomics Genome Annotation apollo2 gmod work-in-progress -
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• intermediateSequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio -
e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• intermediateSequence assembly Chromosome conformation capture Assembly VGP biodiversity eukaryote pacbio -
e-learning
Large genome assembly and polishing
• beginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote