Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Comparative transcriptomics
    • Bottom-up proteomics31
    • Discovery proteomics31
    • Exomes31
    • Genome annotation31
    • Genomes31
    • Genomics31
    • MS-based targeted proteomics31
    • MS-based untargeted proteomics31
    • Metaproteomics31
    • Peptide identification31
    • Personal genomics31
    • Protein and peptide identification31
    • Proteomics31
    • Quantitative proteomics31
    • Synthetic genomics31
    • Targeted proteomics31
    • Top-down proteomics31
    • Viral genomics31
    • Whole genomes31
    • Bayesian methods20
    • Biostatistics20
    • Descriptive statistics20
    • Gaussian processes20
    • Inferential statistics20
    • Markov processes20
    • Multivariate statistics20
    • Probabilistic graphical model20
    • Probability20
    • Statistics20
    • Statistics and probability20
    • Assembly19
    • Sequence assembly19
    • Algorithms18
    • Computer programming18
    • Data structures18
    • Programming languages18
    • Software development18
    • Software engineering18
    • Transcriptome18
    • Transcriptomics18
    • Antimicrobial stewardship17
    • Biological sequences17
    • Medical microbiology17
    • Microbial genetics17
    • Microbial physiology17
    • Microbial surveillance17
    • Microbiological surveillance17
    • Microbiology17
    • Molecular infection biology17
    • Molecular microbiology17
    • Sequence analysis17
    • Sequence databases17
    • Computational ecology14
    • DNA variation14
    • Ecoinformatics14
    • Ecological informatics14
    • Ecology14
    • Ecosystem science14
    • Genetic variation14
    • Genomic variation14
    • Mutation14
    • Polymorphism14
    • Somatic mutations14
    • Biodiversity10
    • Community analysis9
    • Environmental microbiology9
    • Microbial ecology9
    • Microbiome9
    • Molecular community analysis9
    • Diffraction experiment8
    • Epigenomics8
    • Imaging8
    • Metagenomics8
    • Microscopy8
    • Microscopy imaging8
    • Optical super resolution microscopy8
    • Photonic force microscopy8
    • Photonic microscopy8
    • Shotgun metagenomics8
    • Computational chemistry7
    • Taxonomy7
    • Epidemiology6
    • Public health6
    • Public health and epidemiology6
    • Communicable disease5
    • De novo genome sequencing5
    • Exometabolomics5
    • Genome sequencing5
    • Infectious disease5
    • LC-MS-based metabolomics5
    • MS-based metabolomics5
    • MS-based targeted metabolomics5
    • MS-based untargeted metabolomics5
    • Mass spectrometry-based metabolomics5
    • Metabolites5
    • Metabolome5
    • Metabolomics5
    • Metabonomics5
    • NMR-based metabolomics5
    • Show N_FILTERS more
    • Tool
    • Galaxy16
    • Cutadapt4
    • FastQC4
    • HISAT24
    • MultiQC4
    • RSeQC4
    • BEDTools3
    • GOseq3
    • SAMtools3
    • STAR3
    • DeepTools2
    • FeatureCounts2
    • Salmon2
    • Trimmomatic2
    • annotatemyids2
    • ggplot22
    • pyGenomeTracks2
    • Biopython1
    • ChiRA1
    • DESeq21
    • EGSEA1
    • Falco1
    • GOEnrichment1
    • IsoformSwitchAnalyzeR1
    • MEME1
    • Peakachu1
    • PfamScan1
    • R1
    • RCAS1
    • SRA Software Toolkit1
    • StringTie1
    • Subread1
    • Targetfinder.org1
    • Trinity1
    • UMI-tools1
    • fastp1
    • fgsea1
    • gffcompare1
    • gffread1
    • limma1
    • miRDeep21
    • pathview1
    • rnaQUAST1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training18
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics18
    • QC3
    • mouse3
    • bulk2
    • collections2
    • cyoa2
    • rna-seq2
    • alternative splicing1
    • drosophila1
    • interactive-tools1
    • isoform switching1
    • limma-voom1
    • miRNA1
    • plants1
    • stress tolerance1
    • viz1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner16
    • Advanced1
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International18
    • Show N_FILTERS more
    • Target audience
    • Students18
    • Show N_FILTERS more
    • Author
    • Maria Doyle7
    • Belinda Phipson3
    • Bérénice Batut3
    • Mallory Freeberg3
    • Pavankumar Videm3
    • Anthony Bretaudeau2
    • Cristóbal Gallardo2
    • Harriet Dashnow2
    • Lucille Delisle2
    • Mo Heydarian2
    • Anika Erxleben1
    • Anna Trigos1
    • Anne Siegel1
    • Anton Nekrutenko1
    • Beatriz Serrano-Solano1
    • Charity Law1
    • Clemens Blank1
    • Daniel Maticzka1
    • Erwan Corre1
    • Florian Heyl1
    • Fotis E. Psomopoulos1
    • Gildas Le Corguillé1
    • Helena Rasche1
    • IGC Bioinformatics Unit1
    • Iacopo Cristoferi1
    • Jovana Maksimovic1
    • Marek Ostaszewski1
    • Mateo Boudet1
    • Matt Ritchie1
    • Matti Hoch1
    • Myrthe van Baardwijk1
    • Nicola Soranzo1
    • Olivier Dameron1
    • Peter van Heusden1
    • Saskia Hiltemann1
    • Shian Su1
    • Toby Hodges1
    • Xavier Garnier1
    • Xi Liu1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning
    • Saskia Hiltemann23
    • Helena Rasche20
    • Nicola Soranzo12
    • Bérénice Batut10
    • Gildas Le Corguillé6
    • Maria Doyle6
    • Niall Beard6
    • Lucille Delisle5
    • Anthony Bretaudeau4
    • Cristóbal Gallardo4
    • Pavankumar Videm4
    • William Durand4
    • Mallory Freeberg3
    • Martin Čech3
    • Armin Dadras2
    • Marius van den Beek2
    • Mehmet Tekman2
    • Wolfgang Maier2
    • Xavier Garnier2
    • Amirhossein Naghsh Nilchi1
    • Andrea Bagnacani1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Beatriz Serrano-Solano1
    • CicoZhang1
    • Clea Siguret1
    • Clemens Blank1
    • Ekaterina Polkh1
    • Florian Heyl1
    • Fotis E. Psomopoulos1
    • Graeme Tyson1
    • Hans-Rudolf Hotz1
    • IGC Bioinformatics Unit1
    • James Taylor1
    • José Manuel Domínguez1
    • Linelle Abueg1
    • Mateusz Kuzak1
    • Matti Hoch1
    • Mira Kuntz1
    • Mo Heydarian1
    • Mélanie Petera1
    • Nate Coraor1
    • Peter-Bram 't Hoen1
    • Sanjay Kumar Srikakulam1
    • Simon Bray1
    • Sofoklis Keisaris1
    • Teresa Müller1
    • The Carpentries1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets18
    • Associated Workflows15
    • Quarto/RMarkdown Notebook1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Comparative transcriptomics

and Contributors: Björn Grüning

and Resource type: e-learning

18 e-learning materials found
  • e-learning

    Genome-wide alternative splicing analysis

    ••• advanced
    Transcriptomics alternative splicing isoform switching
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• intermediate
    Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    RNA Seq Counts to Viz in R

    • beginner
    Transcriptomics interactive-tools
  • e-learning

    1: RNA-Seq reads to counts

    • beginner
    Transcriptomics QC collections mouse
  • e-learning

    2: RNA-seq counts to genes

    • beginner
    Transcriptomics QC limma-voom mouse
  • e-learning

    3: RNA-seq genes to pathways

    • beginner
    Transcriptomics mouse
  • e-learning

    GO Enrichment Analysis

    • beginner
    Transcriptomics
  • e-learning

    RNA-RNA interactome data analysis

    • beginner
    Transcriptomics
  • e-learning

    De novo transcriptome assembly, annotation, and differential expression analysis

    • beginner
    Transcriptomics
  • e-learning

    Visualization of RNA-Seq results with heatmap2

    • beginner
    Transcriptomics
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.