Training materials
Contributors: Cristóbal Gallardo
and Scientific topics: Genome annotation
and Difficulty level: Beginner
7 materials found
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e-learning
Masking repeats with RepeatMasker
• beginnerGenomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote -
e-learning
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy … -
e-learning
Large genome assembly and polishing
• beginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing -
e-learning
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
e-learning
From small to large-scale genome comparison
• beginnerGenomics Genome Annotation plants prokaryote -
e-learning
ERGA post-assembly QC
• beginnerSequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants -
slides
High Performance Computing for Pairwise Genome Comparison
• beginnerGenomics Genome Annotation