TeSS Sandbox (Training eSupport System)

Filter Clear filters
- Tool
- Galaxy248
- FastQC32
- SAMtools25
- BWA17
- MultiQC17
- BEDTools16
- fastp14
- Cutadapt13
- JBrowse12
- SCANPY12
- DeepTools11
- QUAST10
- scikit-learn10
- GEMINI8
- NanoPlot8
- STAR8
- taxonomy_krona_chart8
- BUSCO7
- FreeBayes7
- BCFtools6
- Trimmomatic6
- ggplot26
- BLAST5
- BamTools5
- Bandage5
- Bowtie 25
- FASTX-Toolkit5
- Flye5
- HISAT25
- MetaPhlAn5
- Open Babel5
- RSeQC5
- RStudio5
- kraken25
- msConvert5
- seqtk5
- Biopython4
- Galactic Circos4
- HUMAnN24
- MACS4
- MaxQuant4
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC4
- The Protein Data Bank (PDB)4
- UniProt4
- Workflow4Metabolomics4
- annotatemyids4
- gffread4
- mothur4
- snpEff4
- Apollo3
- Clustal 1.8 (Clustal W, Clustal X)3
- Diamond3
- DropletUtils3
- GOseq3
- Galaxy Image Analysis3
- GraPhlAn3
- KrakenTools3
- MAFFT3
- MSstats3
- Merqury3
- Minimap23
- Newick Utilities3
- QualiMap3
- RDKit3
- SeqCode3
- SortMeRNA3
- Stacks3
- Unicycler3
- Unipept3
- bx-python3
- export2graphlan3
- gffcompare3
- humann3
- lofreq3
- pyGenomeTracks3
- scikit-image3
- snippy3
- xcms3
- Bakta2
- Bio3D2
- Bracken2
- Bwa-mem22
- COMBAT-TB Workbench2
- Cardinal2
- CellProfiler2
- ChEMBL2
- ChIPpeakAnno2
- FeatureCounts2
- GECKO2
- GOEnrichment2
- GenomeScope 2.02
- Gromacs2
- Heinz2
- InterProScan (EBI)2
- IsoformSwitchAnalyzeR2
- MAGeCK2
- MDAnalysis2
- MEGAHIT2
- MEME2
- Medaka2
- Show N_FILTERS more
- Content provider
- Galaxy Training466
- Show N_FILTERS more
- Difficulty level
- Beginner387
- Intermediate67
- Advanced12
- Show N_FILTERS more
- Target audience
- Students357
- Galaxy Administrators74
- Instructors35
- Show N_FILTERS more
- Resource type
- e-learning387
- slides79
- Show N_FILTERS more
- Related resource
- Associated Training Datasets286
- Associated Workflows216
- Quarto/RMarkdown Notebook164
- Jupyter Notebook (with Solutions)36
- Jupyter Notebook (without Solutions)36
- ansible18
- git-gat18
- jobs5
- deploying3
- monitoring3
- collections2
- cyoa2
- kubernetes2
- networking2
- ro-crate2
- storage2
- training2
- wireguard2
- workflows2
- Community1
- DDA1
- ENA1
- FAIR1
- SIG1
- apollo21
- authentication1
- automation1
- beacon1
- broken1
- cloud1
- data1
- fair1
- features1
- ga4gh1
- gmod1
- gtn1
- interactive-tools1
- tags1
- terraform1
- tools1
- work-in-progress1
- Show N_FILTERS more
Show disabled materials
Show archived materials
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month

Training materials

Licence: Creative Commons Attribution 4.0 International

and Contributors: Helena Rasche

466 materials found

Filter

Sort

Filter Clear filters

Training materials

An introduction to scRNA-seq data analysis

Quality Control

Mapping

Reference-based RNA-Seq data analysis

Quality Control

Mapping