Training materials
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e-learning
RNA Seq Counts to Viz in R
• beginnerTranscriptomics interactive-tools -
e-learning
Visualization of RNA-Seq results with Volcano Plot in R
•• intermediateTranscriptomics interactive-tools -
e-learning
Creating high resolution images of Galaxy Workflows
• beginnerUsing Galaxy and Managing your Data workflows -
e-learning
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
e-learning
Introduction to Machine Learning using R
•• intermediateStatistics and probability Statistics and machine learning interactive-tools -
e-learning
Text-mining with the SimText toolset
• beginnerStatistics and probability Statistics and machine learning interactive-tools -
e-learning
A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy
• beginnerStatistics and probability Statistics and machine learning deep-learning image-segmentation interactive-tools jupyter-lab machine-learning protein-3D-structure -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy
• beginnerMIGHTS Single Cell paper-replication -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginnerMIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC