Training materials
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e-learning
Primer and primer scheme design for pan-specific detection and sequencing of viral pathogens across genotypes
• beginnerSequence analysis virology -
e-learning
Deciphering Virus Populations - Single Nucleotide Variants (SNVs) and Specificities in Baculovirus Isolates
•• intermediateGenetic variation Variant Analysis -
e-learning
Data submission using ENA upload Tool
• beginnerEcology -
e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• beginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
e-learning
Genome-wide alternative splicing analysis
••• advancedTranscriptomics alternative splicing isoform switching -
e-learning
RAD-Seq Reference-based data analysis
• beginnerEcology EBV dataset EBV workflow Genetic composition EBV class RAD-seq Species population EBV class biodiversity -
e-learning
RAD-Seq de-novo data analysis
• beginnerEcology EBV dataset EBV workflow Genetic composition EBV class RAD-seq Species populations EBV class biodiversity -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
Automating Galaxy workflows using the command line
• beginnerUsing Galaxy and Managing your Data covid19 variant-analysis workflows -
e-learning
Removal of human reads from SARS-CoV-2 sequencing data
•• intermediateSequence analysis covid19