Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • DNA variation9
    • Genetic variation9
    • Genomic variation9
    • Mutation9
    • Polymorphism9
    • Somatic mutations9
    • Antimicrobial stewardship5
    • Biological sequences5
    • Exomes5
    • Genome annotation5
    • Genomes5
    • Genomics5
    • Medical microbiology5
    • Microbial genetics5
    • Microbial physiology5
    • Microbial surveillance5
    • Microbiological surveillance5
    • Microbiology5
    • Molecular infection biology5
    • Molecular microbiology5
    • Personal genomics5
    • Sequence analysis5
    • Sequence databases5
    • Synthetic genomics5
    • Viral genomics5
    • Whole genomes5
    • Assembly4
    • Sequence assembly4
    • Communicable disease3
    • Comparative transcriptomics3
    • Epidemiology3
    • Infectious disease3
    • Public health3
    • Public health and epidemiology3
    • Transcriptome3
    • Transcriptomics3
    • Transmissible disease3
    • Community analysis2
    • Computational ecology2
    • De novo genome sequencing2
    • Ecoinformatics2
    • Ecological informatics2
    • Ecology2
    • Ecosystem science2
    • Environmental microbiology2
    • Epigenomics2
    • Evolution2
    • Evolutionary biology2
    • Genome sequencing2
    • Microbial ecology2
    • Microbiome2
    • Molecular community analysis2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • Bottom-up proteomics1
    • DNA polymorphism1
    • Discovery proteomics1
    • Disease1
    • MS-based targeted proteomics1
    • MS-based untargeted proteomics1
    • Metagenomics1
    • Metaproteomics1
    • Microsatellites1
    • Pathology1
    • Peptide identification1
    • Phylogenetic clocks1
    • Phylogenetic dating1
    • Phylogenetic simulation1
    • Phylogenetic stratigraphy1
    • Phylogeny1
    • Phylogeny reconstruction1
    • Protein and peptide identification1
    • Proteomics1
    • Quantitative proteomics1
    • RFLP1
    • SNP1
    • Shotgun metagenomics1
    • Single nucleotide polymorphism1
    • Targeted proteomics1
    • Taxonomy1
    • Top-down proteomics1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy29
    • SAMtools11
    • fastp9
    • BWA8
    • FastQC8
    • MultiQC8
    • BCFtools7
    • Falco7
    • Trimmomatic5
    • BEDTools3
    • FreeBayes3
    • GEMINI3
    • NanoPlot3
    • RSeQC3
    • STAR3
    • ggplot23
    • kraken23
    • pyGenomeTracks3
    • seqtk3
    • BamTools2
    • Bandage2
    • COMBAT-TB Workbench2
    • Cutadapt2
    • DeepTools2
    • IsoformSwitchAnalyzeR2
    • MAFFT2
    • PfamScan2
    • QualiMap2
    • SRA Software Toolkit2
    • Stacks2
    • StringTie2
    • Trim Galore2
    • compute_sequence_length2
    • gffcompare2
    • gffread2
    • rnaQUAST2
    • snippy2
    • tb-profiler2
    • ABRicate1
    • BLAST1
    • Bowtie 21
    • Bracken1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • DESeq21
    • EGA1
    • FASTQE1
    • FREEC1
    • FastTree1
    • FeatureCounts1
    • Flye1
    • GOseq1
    • Galactic Circos1
    • IDR1
    • JBrowse1
    • Jvarkit1
    • KrakenTools1
    • MACS1
    • MEME1
    • MLST1
    • MSstats1
    • MaxQuant1
    • Medaka1
    • MethylDackel1
    • Minimap21
    • NCBI Resources1
    • Newick Utilities1
    • QUAST1
    • R1
    • RAxML1
    • Recentrifuge1
    • SeqCode1
    • UCSC Genome Browser Utilities1
    • Unicycler1
    • VarScan1
    • Vcflib1
    • iVar1
    • lofreq1
    • pathview1
    • pycoQC1
    • shovill1
    • snpEff1
    • taxonomy_krona_chart1
    • varVAMP1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training29
    • Show N_FILTERS more
    • Keyword
    • Variant Analysis9
    • microgalaxy6
    • one-health5
    • Sequence analysis4
    • covid194
    • Transcriptomics3
    • biodiversity3
    • cyoa3
    • prokaryote3
    • virology3
    • Assembly2
    • EBV dataset2
    • EBV workflow2
    • Ecology2
    • Epigenetics2
    • Evolution2
    • Genetic composition EBV class2
    • RAD-seq2
    • illumina2
    • Contributing to the Galaxy Training Material1
    • DDA1
    • Heatmap1
    • Introduction to Galaxy Analyses1
    • Microbiome1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • Proteomics1
    • QC1
    • Species population EBV class1
    • Species populations EBV class1
    • TMT1
    • Using Galaxy and Managing your Data1
    • alternative splicing1
    • assembly1
    • bacteria1
    • bulk1
    • collections1
    • drosophila1
    • isoform switching1
    • phylogenetics1
    • rna-seq1
    • tuberculosis1
    • variant-analysis1
    • workflows1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner21
    • Intermediate5
    • Advanced3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International29
    • Show N_FILTERS more
    • Target audience
    • Students28
    • Instructors1
    • Show N_FILTERS more
    • Author
    • Wolfgang Maier10
    • Bérénice Batut7
    • Helena Rasche3
    • Lucille Delisle3
    • Saskia Hiltemann3
    • Anika Erxleben2
    • Anton Nekrutenko2
    • Björn Grüning2
    • Christoph Stritt2
    • Clemens Blank2
    • Cristóbal Gallardo2
    • Daniela Brites2
    • Galo A. Goig2
    • Maria Doyle2
    • Nicola Soranzo2
    • Pavankumar Videm2
    • Peter van Heusden2
    • Verena Moosmann2
    • Yvan Le Bras2
    • Alexandre Cormier1
    • Anne Pajon1
    • Anthony Bretaudeau1
    • Bazante Sanders1
    • Cameron Hyde1
    • Clea Siguret1
    • Daniel Blankenberg1
    • Dave Clements1
    • David Salgado1
    • Devon Ryan1
    • Elischa Berger1
    • Engy Nasr1
    • Erwan Corre1
    • Florian Heyl1
    • Jasper Ouwerkerk1
    • Joachim Wolff1
    • Jörg Wennmann1
    • Katarzyna Kamieniecka1
    • Khaled Jum'ah1
    • Klemens Fröhlich1
    • Krzysztof Poterlowicz1
    • Laura Leroi1
    • Mallory Freeberg1
    • Marius van den Beek1
    • Matthias Fahrner1
    • Melanie Föll1
    • Mo Heydarian1
    • Paul Zierep1
    • Simon Bray1
    • Simon Gladman1
    • Stéphanie Robin1
    • Thoba Lose1
    • Tomas Klingström1
    • Torsten Houwaart1
    • Show N_FILTERS more
    • Contributor
    • Wolfgang Maier
    • Saskia Hiltemann243
    • Helena Rasche217
    • Björn Grüning203
    • Bérénice Batut119
    • Nicola Soranzo64
    • Cristóbal Gallardo50
    • Anthony Bretaudeau42
    • Niall Beard40
    • Martin Čech34
    • Gildas Le Corguillé31
    • Armin Dadras30
    • Mehmet Tekman30
    • Wendi Bacon30
    • Melanie Föll28
    • Pavankumar Videm28
    • Teresa Müller28
    • William Durand28
    • Subina Mehta25
    • Simon Bray21
    • Yvan Le Bras21
    • Maria Doyle19
    • Anup Kumar16
    • Beatriz Serrano-Solano16
    • Deepti Varshney13
    • Julia Jakiela13
    • Pratik Jagtap13
    • Timothy J. Griffin13
    • Lucille Delisle12
    • Nate Coraor12
    • Anne Fouilloux11
    • Anton Nekrutenko10
    • Pablo Moreno10
    • Paul Zierep9
    • Simon Gladman9
    • David López8
    • Leonid Kostrykin8
    • Marisa Loach8
    • Matthias Bernt8
    • Mélanie Petera8
    • Stéphanie Robin8
    • Kaivan Kamali7
    • Marius van den Beek7
    • Verena Moosmann7
    • Alexandre Cormier6
    • Clemens Blank6
    • Hans-Rudolf Hotz6
    • Mallory Freeberg6
    • Morgan Howells6
    • Alireza Khanteymoori5
    • Anna Syme5
    • Bert Droesbeke5
    • Christopher Barnett5
    • Delphine Lariviere5
    • Florian Christoph Sigloch5
    • Marie Josse5
    • Peter van Heusden5
    • Clea Siguret4
    • Diana Chiang Jurado4
    • Florian Heyl4
    • Linelle Abueg4
    • Amirhossein Naghsh Nilchi3
    • Bazante Sanders3
    • Coline Royaux3
    • Dave Clements3
    • Ekaterina Polkh3
    • Engy Nasr3
    • Joachim Wolff3
    • Katarzyna Kamieniecka3
    • Khaled Jum'ah3
    • Mateo Boudet3
    • Miaomiao Zhou3
    • Timon Schlegel3
    • Alex Ostrovsky2
    • Anika Erxleben2
    • Carlos Chee Mendonça2
    • Christine Oger2
    • Christoph Stritt2
    • CicoZhang2
    • Donny Vrins2
    • Enis Afgan2
    • Esteban Perez-Wohlfeil2
    • Fabio Cumbo2
    • Fidel Ramirez2
    • Florence Combes2
    • Graeme Tyson2
    • Jayadev Joshi2
    • Jennifer Hillman-Jackson2
    • Jonathan Kreplak2
    • Jonathan Manning2
    • Kenza Bazi-Kabbaj2
    • Laura Leroi2
    • Leily Rabbani2
    • Nadia Goué2
    • Riccardo Massei2
    • Romane LIBOUBAN2
    • Solenne Correard2
    • Swathi Nataraj2
    • Thomas Wollmann2
    • Vijay2
    • Show N_FILTERS more
    • Resource type
    • e-learning28
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows
    • Associated Training Datasets23
    • Quarto/RMarkdown Notebook3
    • git-gat2
    • ansible1
    • storage1
    • tools1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Wolfgang Maier

and Related resources: Associated Workflows

29 materials found
  • e-learning

    CUT&RUN data analysis

    • beginner
    Epigenomics Epigenetics
  • e-learning

    Somatic Variant Discovery from WES Data Using Control-FREEC

    • beginner
    Genetic variation Variant Analysis
  • e-learning

    Exome sequencing data analysis for diagnosing a genetic disease

    • beginner
    Genetic variation Variant Analysis
  • e-learning

    Mapping and molecular identification of phenotype-causing mutations

    • beginner
    Genetic variation Variant Analysis
  • e-learning

    Identification of somatic and germline variants from tumor and normal sample pairs

    • beginner
    Genetic variation Variant Analysis
  • slides

    Identification of non-canonical ORFs and their potential biological function

    • beginner
    Transcriptomics
  • e-learning

    Galaxy Basics for genomics

    • beginner
    Introduction to Galaxy Analyses
  • e-learning

    Quality Control

    • beginner
    Sequence analysis
  • e-learning

    Reference-based RNA-Seq data analysis

    • beginner
    Transcriptomics QC bulk collections cyoa drosophila rna-seq
  • 1
  • 2
  • 3
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.