Training materials
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e-learning
DIA Analysis using OpenSwathWorkflow
•• intermediateProteomics DIA -
e-learning
Library Generation for DIA Analysis
•• intermediateProteomics DIA -
e-learning
metaQuantome 1: Data creation
•• intermediateProteomics Proteogenomics Biodiversity Taxonomy microgalaxy -
e-learning
Statistical analysis of DIA data
•• intermediateProteomics DIA -
e-learning
metaQuantome 3: Taxonomy
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics Taxonomy microgalaxy -
e-learning
Secretome Prediction
•• intermediateProteomics human work-in-progress -
e-learning
Advanced R in Galaxy
•• intermediateSoftware engineering Foundations of Data Science R -
e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
e-learning
Genome annotation with Maker (short)
•• intermediateGenome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• intermediateSequence assembly Assembly VGP eukaryote pacbio