Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Microbiological surveillance
    • Assembly17
    • Sequence assembly17
    • Exomes10
    • Genome annotation10
    • Genomes10
    • Genomics10
    • Personal genomics10
    • Synthetic genomics10
    • Viral genomics10
    • Whole genomes10
    • Biodiversity7
    • Antimicrobial stewardship4
    • Medical microbiology4
    • Microbial genetics4
    • Microbial physiology4
    • Microbial surveillance4
    • Microbiology4
    • Molecular infection biology4
    • Molecular microbiology4
    • De novo genome sequencing2
    • Epidemiology2
    • Genome sequencing2
    • Public health2
    • Public health and epidemiology2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • 3C technologies1
    • 3C-based methods1
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Data clean-up1
    • Data cleaning1
    • Data integrity1
    • Data quality1
    • Data quality management1
    • Extensive drug resistance (XDR)1
    • Metagenomics1
    • Mitochondria1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Pandrug resistance (PDR)1
    • Shotgun metagenomics1
    • Total drug resistance (TDR)1
    • Show N_FILTERS more
    • Tool
    • Galaxy4
    • Bandage2
    • FastQC2
    • QUAST2
    • fastp2
    • BEDTools1
    • Bwa-mem21
    • Circos1
    • Falco1
    • Filtlong1
    • Flye1
    • Galactic Circos1
    • NanoPlot1
    • Polypolish1
    • Unicycler1
    • compute_sequence_length1
    • shovill1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training4
    • Show N_FILTERS more
    • Keyword
    • Assembly
    • microgalaxy20
    • prokaryote9
    • Genome Annotation8
    • gmod6
    • jbrowse16
    • illumina5
    • bacteria4
    • one-health4
    • Evolution3
    • Variant Analysis3
    • amr3
    • assembly3
    • work-in-progress3
    • Microbiome2
    • biodiversity2
    • nanopore2
    • AMR1
    • Bacteria1
    • Ecology1
    • Metabolites1
    • Metabolome1
    • Open access1
    • Pathogens1
    • Pathogens Portal1
    • Sequence analysis1
    • Small molecules1
    • apollo21
    • essential genes1
    • microbial ecosystems1
    • microbiome1
    • phylogenetics1
    • plasmids1
    • tnseq1
    • tuberculosis1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner4
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International4
    • Show N_FILTERS more
    • Target audience
    • Students4
    • Show N_FILTERS more
    • Author
    • Anton Nekrutenko2
    • Bazante Sanders2
    • Bérénice Batut2
    • Delphine Lariviere2
    • Helena Rasche1
    • Simon Gladman1
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau4
    • Björn Grüning4
    • Bérénice Batut4
    • Helena Rasche4
    • Saskia Hiltemann4
    • Anton Nekrutenko2
    • Bazante Sanders2
    • Cristóbal Gallardo2
    • Miaomiao Zhou2
    • Niall Beard2
    • Nicola Soranzo2
    • Deepti Varshney1
    • Delphine Lariviere1
    • Enis Afgan1
    • Gildas Le Corguillé1
    • Maria Doyle1
    • Matúš Kalaš1
    • Nate Coraor1
    • Teresa Müller1
    • Verena Moosmann1
    • William Durand1
    • Wolfgang Maier1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets4
    • Associated Workflows4
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Microbiological surveillance

and Keywords: Assembly

and Resource type: e-learning

4 e-learning materials found
  • e-learning

    Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
  • e-learning

    Making sense of a newly assembled genome

    • beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
  • e-learning

    Unicycler Assembly

    • beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.