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Tools: SCANPY

14 materials found
  • e-learning

    Pseudobulk Analysis with Decoupler and EdgeR

    • beginner
    Single Cell pseudobulk transcriptomics
  • e-learning

    Single-cell ATAC-seq standard processing with SnapATAC2

    •• intermediate
    10x Single Cell epigenetics single-cell
  • e-learning

    Converting between common single cell data formats

    • beginner
    Single Cell data import data management
  • e-learning

    Converting NCBI Data to the AnnData Format

    • beginner
    Single Cell data import data management
  • e-learning

    Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution

    • beginner
    Single Cell data management
  • e-learning

    Importing files from public atlases

    • beginner
    Single Cell data import data management
  • e-learning

    Inferring single cell trajectories with Scanpy

    • beginner
    MIGHTS Single Cell paper-replication
  • e-learning

    Removing the effects of the cell cycle

    • beginner
    Single Cell
  • e-learning

    Pre-processing of 10X Single-Cell ATAC-seq Datasets

    • beginner
    10x Single Cell epigenetics
  • e-learning

    Filter, plot and explore single-cell RNA-seq data with Scanpy

    • beginner
    MIGHTS Single Cell paper-replication
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