Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Antimicrobial stewardship2
    • Assembly2
    • Biological sequences2
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Medical microbiology2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Personal genomics2
    • Sequence analysis2
    • Sequence assembly2
    • Sequence databases2
    • Synthetic genomics2
    • Viral genomics2
    • Whole genomes2
    • Comparative transcriptomics1
    • DNA variation1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Genetic linkage1
    • Genetic variation1
    • Genomic variation1
    • Linkage1
    • Linkage mapping1
    • Mapping1
    • Mutation1
    • Polymorphism1
    • Protein families1
    • Protein sequence classification1
    • Somatic mutations1
    • Synteny1
    • Transcriptome1
    • Transcriptomics1
    • Show N_FILTERS more
    • Tool
    • Galaxy14
    • Galactic Circos4
    • BEDTools2
    • Circos2
    • FastQC2
    • JBrowse2
    • Apollo1
    • BCFtools1
    • BamTools1
    • Cutadapt1
    • DeepTools1
    • EGA1
    • FASTX-Toolkit1
    • FeatureCounts1
    • GEMINI1
    • GOseq1
    • HISAT21
    • MultiQC1
    • RSeQC1
    • SAMtools1
    • SPAdes1
    • SRA Software Toolkit1
    • VelvetOptimiser1
    • annotatemyids1
    • bx-python1
    • compute_sequence_length1
    • limma1
    • seqtk1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training14
    • Show N_FILTERS more
    • Keyword
    • Introduction to Galaxy Analyses3
    • Visualisation3
    • Assembly2
    • cyoa2
    • gmod2
    • jbrowse12
    • microgalaxy2
    • prokaryote2
    • Contributing to the Galaxy Training Material1
    • Genome Annotation1
    • Sequence analysis1
    • Transcriptomics1
    • Using Galaxy and Managing your Data1
    • Variant Analysis1
    • apollo21
    • biodiversity1
    • bulk1
    • rna-seq1
    • viz1
    • workflows1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner8
    • Intermediate5
    • Advanced1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International14
    • Show N_FILTERS more
    • Target audience
    • Students13
    • Instructors1
    • Show N_FILTERS more
    • Author
    • Helena Rasche
    • Bérénice Batut29
    • Saskia Hiltemann17
    • Subina Mehta16
    • Anthony Bretaudeau12
    • Björn Grüning11
    • Pratik Jagtap11
    • Cristóbal Gallardo10
    • Maria Doyle10
    • Mehmet Tekman10
    • Melanie Föll10
    • Anton Nekrutenko9
    • Anup Kumar9
    • Pavankumar Videm9
    • Simon Bray9
    • Delphine Lariviere8
    • Timothy J. Griffin8
    • Wendi Bacon8
    • Wolfgang Maier8
    • Matthias Fahrner7
    • Nicola Soranzo7
    • Praveen Kumar7
    • Anika Erxleben6
    • Daniel Blankenberg6
    • Emma Leith6
    • Erwan Corre6
    • Florian Christoph Sigloch6
    • Simon Gladman6
    • Stéphanie Robin6
    • Yvan Le Bras6
    • Alexandre Cormier5
    • Anna Syme5
    • Anne Fouilloux5
    • Dave Clements5
    • Dechen Bhuming5
    • James Johnson5
    • Joachim Wolff5
    • Julia Jakiela5
    • Katherine Do5
    • Laura Leroi5
    • Leonid Kostrykin5
    • Marie Josse5
    • Ray Sajulga5
    • Alex Ostrovsky4
    • Alireza Khanteymoori4
    • Beatriz Serrano-Solano4
    • Christopher Barnett4
    • Clemens Blank4
    • Diana Chiang Jurado4
    • Lucille Delisle4
    • Mallory Freeberg4
    • Marius van den Beek4
    • Vivek Bhardwaj4
    • Bazante Sanders3
    • Belinda Phipson3
    • Engy Nasr3
    • Fidel Ramirez3
    • Florian Heyl3
    • Katarzyna Kamieniecka3
    • Khaled Jum'ah3
    • Krzysztof Poterlowicz3
    • Marie Crane3
    • Marisa Loach3
    • Mo Heydarian3
    • Morgan Howells3
    • Nadia Goué3
    • Paul Zierep3
    • Tharindu Senapathi3
    • Anne Pajon2
    • Christoph Stritt2
    • Daniela Brites2
    • Ekaterina Polkh2
    • Friederike Dündar2
    • Galo A. Goig2
    • Gildas Le Corguillé2
    • Hans-Rudolf Hotz2
    • Harriet Dashnow2
    • Jayadev Joshi2
    • Kaivan Kamali2
    • Leily Rabbani2
    • Miguel Roncoroni2
    • Peter van Heusden2
    • Riccardo Massei2
    • Thomas Wollmann2
    • Torsten Seemann2
    • Ahmed Hamid Awan1
    • Anna Trigos1
    • Bert Droesbeke1
    • Boris Depoortere1
    • Brandon Pickett1
    • Cameron Hyde1
    • Camila Goclowski1
    • Charity Law1
    • Clara Urfer1
    • Clea Siguret1
    • Coline Royaux1
    • Daniel Maticzka1
    • Daniela Schneider1
    • David Christiany1
    • David Salgado1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning
    • Saskia Hiltemann15
    • Helena Rasche14
    • Bérénice Batut8
    • Anthony Bretaudeau7
    • Nicola Soranzo7
    • Niall Beard6
    • Maria Doyle5
    • Gildas Le Corguillé4
    • William Durand4
    • Cristóbal Gallardo3
    • David López3
    • Nate Coraor3
    • Teresa Müller3
    • Wolfgang Maier3
    • Anton Nekrutenko2
    • Armin Dadras2
    • Dave Clements2
    • Mehmet Tekman2
    • Simon Bray2
    • Simon Gladman2
    • Wendi Bacon2
    • Beatriz Serrano-Solano1
    • Bert Droesbeke1
    • Clemens Blank1
    • Cyril Monjeaud1
    • Ekaterina Polkh1
    • Hans-Rudolf Hotz1
    • Jasper Ouwerkerk1
    • José Manuel Domínguez1
    • Linelle Abueg1
    • Lucille Delisle1
    • Marius van den Beek1
    • Martin Čech1
    • Matthias Bernt1
    • Matti Hoch1
    • Mira Kuntz1
    • Sanjay Kumar Srikakulam1
    • Stéphanie Robin1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Resource type
    • e-learning12
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows
    • Quarto/RMarkdown Notebook46
    • Associated Training Datasets31
    • ansible14
    • git-gat11
    • jobs4
    • monitoring3
    • deploying2
    • storage2
    • Jupyter Notebook (with Solutions)1
    • Jupyter Notebook (without Solutions)1
    • authentication1
    • automation1
    • broken1
    • cloud1
    • collections1
    • cyoa1
    • features1
    • interactive-tools1
    • tags1
    • terraform1
    • tools1
    • training1
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Authors: Helena Rasche

and Contributors: Björn Grüning

and Related resources: Associated Workflows

14 materials found
  • e-learning

    Using Workflow Parameters

    •• intermediate
    Using Galaxy and Managing your Data workflows
  • e-learning

    Pathway analysis with the MINERVA Platform

    •• intermediate
    Transcriptomics bulk cyoa rna-seq viz
  • e-learning

    Refining Genome Annotations with Apollo (prokaryotes)

    •• intermediate
    Genomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 biodiversity gmod jbrowse1 microgalaxy …
  • e-learning

    Making sense of a newly assembled genome

    • beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
  • e-learning

    Trio Analysis using Synthetic Datasets from RD-Connect GPAP

    ••• advanced
    Genetic variation Variant Analysis cyoa
  • e-learning

    Creating a new tutorial

    • beginner
    Contributing to the Galaxy Training Material
  • e-learning

    Visualisation with Circos

    •• intermediate
    Visualisation
  • e-learning

    Ploting a Microbial Genome with Circos

    •• intermediate
    Visualisation
  • slides

    Circos

    • beginner
    Visualisation
  • slides

    A Short Introduction to Galaxy

    • beginner
    Introduction to Galaxy Analyses
  • 1
  • 2
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.