Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Sequence databases
    • Assembly14
    • Sequence assembly14
    • Exomes12
    • Genome annotation12
    • Genomes12
    • Genomics12
    • Personal genomics12
    • Synthetic genomics12
    • Viral genomics12
    • Whole genomes12
    • Algorithms9
    • Computer programming9
    • Data structures9
    • Programming languages9
    • Software development9
    • Software engineering9
    • Biological sequences8
    • Comparative transcriptomics8
    • Sequence analysis8
    • Transcriptome8
    • Transcriptomics8
    • Community analysis6
    • Environmental microbiology6
    • Epigenomics6
    • Metagenomics6
    • Microbial ecology6
    • Microbiome6
    • Molecular community analysis6
    • Shotgun metagenomics6
    • Biodiversity5
    • Epidemiology4
    • Public health4
    • Public health and epidemiology4
    • Taxonomy4
    • Antimicrobial stewardship3
    • Exometabolomics3
    • LC-MS-based metabolomics3
    • MS-based metabolomics3
    • MS-based targeted metabolomics3
    • MS-based untargeted metabolomics3
    • Mass spectrometry-based metabolomics3
    • Medical microbiology3
    • Metabolites3
    • Metabolome3
    • Metabolomics3
    • Metabonomics3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • NMR-based metabolomics3
    • Bayesian methods2
    • Biostatistics2
    • DNA variation2
    • De novo genome sequencing2
    • Descriptive statistics2
    • Diffraction experiment2
    • Gaussian processes2
    • Genetic variation2
    • Genome sequencing2
    • Genomic variation2
    • Imaging2
    • Inferential statistics2
    • Markov processes2
    • Microscopy2
    • Microscopy imaging2
    • Multivariate statistics2
    • Mutation2
    • Optical super resolution microscopy2
    • Photonic force microscopy2
    • Photonic microscopy2
    • Polymorphism2
    • Probabilistic graphical model2
    • Probability2
    • Somatic mutations2
    • Statistics2
    • Statistics and probability2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • 3C technologies1
    • 3C-based methods1
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Biomimeic chemistry1
    • Bottom-up proteomics1
    • Chromatin accessibility1
    • Chromatin accessibility assay1
    • Chromosome conformation analysis1
    • Chromosome conformation capture1
    • Communicable disease1
    • Computational ecology1
    • Show N_FILTERS more
    • Tool
    • Galaxy8
    • FastQC4
    • kraken24
    • taxonomy_krona_chart4
    • KrakenTools3
    • NanoPlot3
    • fastp3
    • BamTools2
    • Cutadapt2
    • FASTQE2
    • SAMtools2
    • pycoQC2
    • ABRicate1
    • BCFtools1
    • BEDTools1
    • BLAST1
    • Bandage1
    • Bracken1
    • Clair31
    • Clustal 2 (Clustal W, Clustal X)1
    • Diamond1
    • FastTree1
    • Flye1
    • JBrowse1
    • MLST1
    • Medaka1
    • MetaPhlAn1
    • Minimap21
    • MultiQC1
    • Newick Utilities1
    • ggplot21
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training8
    • Show N_FILTERS more
    • Keyword
    • Microbiome4
    • Sequence analysis4
    • microgalaxy4
    • metagenomics2
    • nanopore2
    • plants2
    • 16S1
    • Heatmap1
    • Nanopore data analysis1
    • Pathogens detection1
    • Phylogenetic tree1
    • beer1
    • citizen science1
    • cyoa1
    • metabarcoding1
    • taxonomic profiling1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner8
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International8
    • Show N_FILTERS more
    • Target audience
    • Students8
    • Show N_FILTERS more
    • Author
    • Bérénice Batut5
    • Alexandre Cormier2
    • Anthony Bretaudeau2
    • Cristóbal Gallardo2
    • Engy Nasr2
    • Erwan Corre2
    • Laura Leroi2
    • Paul Zierep2
    • Stéphanie Robin2
    • Cameron Hyde1
    • Deepti Varshney1
    • Joachim Wolff1
    • Maria Doyle1
    • Polina Polunina1
    • Saskia Hiltemann1
    • Siyu Chen1
    • Sophia Hampe1
    • Teresa Müller1
    • Show N_FILTERS more
    • Contributor
    • Cristóbal Gallardo
    • Saskia Hiltemann28
    • Bérénice Batut27
    • Helena Rasche26
    • Björn Grüning19
    • Anthony Bretaudeau11
    • Niall Beard9
    • Nicola Soranzo9
    • Teresa Müller7
    • William Durand7
    • Paul Zierep6
    • Deepti Varshney5
    • Wolfgang Maier5
    • Maria Doyle4
    • Engy Nasr3
    • Alexandre Cormier2
    • Anton Nekrutenko2
    • Anup Kumar2
    • Clea Siguret2
    • Gildas Le Corguillé2
    • Mateo Boudet2
    • Matthias Bernt2
    • Natalie Kucher2
    • Nate Coraor2
    • Simon Bray2
    • Simon Gladman2
    • Swathi Nataraj2
    • Verena Moosmann2
    • Willem de Koning2
    • Aitor Apaolaza 1
    • Alex Ostrovsky1
    • Anika Erxleben1
    • Anna Syme1
    • Anne Fouilloux1
    • Ava Hoffman1
    • Bazante Sanders1
    • Beatriz Serrano-Solano1
    • Bert Droesbeke1
    • Candace Savonen1
    • Chris Child1
    • Daan van Vugt1
    • Delphine Lariviere1
    • Donny Vrins1
    • Ekaterina Polkh1
    • Elizabeth Humphries1
    • Eric Tvedte1
    • Finn Bacall1
    • Frederick Tan1
    • Hans-Rudolf Hotz1
    • Janick Mathys1
    • Jennifer Hillman-Jackson1
    • Katherine Cox1
    • Linelle Abueg1
    • Mehmet Tekman1
    • Miaomiao Zhou1
    • Milo Thurston1
    • Mélanie Petera1
    • Nick May1
    • Nuwan Goonasekera1
    • Peter van Heusden1
    • Siyu Chen1
    • Stéphanie Robin1
    • Tarnima Omara1
    • Vijay1
    • mmiladi1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning6
    • slides2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets8
    • Associated Workflows7
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Sequence databases

and Contributors: Cristóbal Gallardo

8 materials found
  • e-learning

    Identification of the micro-organisms in a beer using Nanopore sequencing

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore
  • e-learning

    Taxonomic Profiling and Visualization of Metagenomic Data

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling
  • e-learning

    Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

    • beginner
    Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
  • e-learning

    16S Microbial analysis with Nanopore data

    • beginner
    Metagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding 16S Microbiome metabarcoding microgalaxy nanopore …
  • e-learning

    NCBI BLAST+ against the MAdLand

    • beginner
    Sequence analysis plants
  • e-learning

    Quality Control

    • beginner
    Sequence analysis
  • slides

    Quality Control

    • beginner
    Sequence analysis
  • slides

    Mapping

    • beginner
    Sequence analysis
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.