Please note: This instance is for testing/development, and any content submitted may be changed or deleted without warning.
Training eSupport System
  • Log In
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Trainers
    • Providers
    • Nodes

TeSS makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Assembly7
    • Sequence assembly7
    • Exomes5
    • Genome annotation5
    • Genomes5
    • Genomics5
    • Personal genomics5
    • Synthetic genomics5
    • Viral genomics5
    • Whole genomes5
    • Antimicrobial stewardship4
    • Medical microbiology4
    • Microbial genetics4
    • Microbial physiology4
    • Microbial surveillance4
    • Microbiological surveillance4
    • Microbiology4
    • Molecular infection biology4
    • Molecular microbiology4
    • Biodiversity2
    • De novo genome sequencing2
    • Epidemiology2
    • Genome sequencing2
    • Public health2
    • Public health and epidemiology2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Data clean-up1
    • Data cleaning1
    • Data integrity1
    • Data quality1
    • Data quality management1
    • Extensive drug resistance (XDR)1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Pandrug resistance (PDR)1
    • Total drug resistance (TDR)1
    • Show N_FILTERS more
    • Tool
    • Galaxy7
    • QUAST4
    • Flye3
    • BUSCO2
    • Bandage2
    • FastQC2
    • NanoPlot2
    • fastp2
    • BEDTools1
    • BWA1
    • Bwa-mem21
    • Circos1
    • Falco1
    • Filtlong1
    • Galactic Circos1
    • Merqury1
    • Polypolish1
    • Unicycler1
    • compute_sequence_length1
    • pilon1
    • shovill1
    • Show N_FILTERS more
    • Content provider
    • Galaxy Training7
    • Show N_FILTERS more
    • Keyword
    • Assembly
    • Genome Annotation17
    • Foundations of Data Science16
    • gmod14
    • jbrowse114
    • microgalaxy14
    • jupyter-notebook12
    • biodiversity11
    • Galaxy Server administration10
    • ansible7
    • eukaryote7
    • prokaryote7
    • work-in-progress7
    • SQL5
    • git-gat5
    • interactive-tools5
    • R4
    • Single Cell4
    • Teaching and Hosting Galaxy training4
    • Transcriptomics4
    • assembly4
    • Contributing to the Galaxy Training Material3
    • Sequence analysis3
    • Variant Analysis3
    • apollo23
    • bash3
    • illumina3
    • Development in Galaxy2
    • Using Galaxy and Managing your Data2
    • Visualisation2
    • amr2
    • cyoa2
    • deploying2
    • game2
    • maker2
    • nanopore2
    • one-health2
    • rmarkdown-notebook2
    • storage2
    • 10x1
    • CRISPR1
    • Computational chemistry1
    • Ecology1
    • Evolution1
    • Introduction to Galaxy Analyses1
    • Proteomics1
    • Python1
    • Statistics and machine learning1
    • annotation1
    • automation1
    • bacteria1
    • broken1
    • cell line1
    • cloud1
    • cookbook1
    • covid191
    • essential genes1
    • eukaryota1
    • evolution1
    • gbif1
    • genome editing1
    • helixer1
    • intermine1
    • jobs1
    • modeling1
    • monitoring1
    • pacbio1
    • plants1
    • proteogenomics1
    • quality control1
    • species populations EBV class1
    • terraform1
    • tools1
    • tuberculosis1
    • vgp1
    • Show N_FILTERS more
    • Difficulty level
    • Beginner5
    • Intermediate2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International7
    • Show N_FILTERS more
    • Target audience
    • Students7
    • Show N_FILTERS more
    • Author
    • Alexandre Cormier2
    • Anthony Bretaudeau2
    • Anton Nekrutenko2
    • Bazante Sanders2
    • Bérénice Batut2
    • Delphine Lariviere2
    • Erwan Corre2
    • Laura Leroi2
    • Stéphanie Robin2
    • Anna Syme1
    • Helena Rasche1
    • Simon Gladman1
    • Solenne Correard1
    • Show N_FILTERS more
    • Contributor
    • Anthony Bretaudeau
    • Bérénice Batut17
    • Saskia Hiltemann16
    • Björn Grüning15
    • Helena Rasche14
    • Cristóbal Gallardo10
    • Anna Syme5
    • Deepti Varshney5
    • Delphine Lariviere5
    • Teresa Müller5
    • Anton Nekrutenko4
    • Niall Beard4
    • Nicola Soranzo4
    • Maria Doyle3
    • Simon Gladman3
    • William Durand3
    • Bazante Sanders2
    • Gildas Le Corguillé2
    • Linelle Abueg2
    • Miaomiao Zhou2
    • Solenne Correard2
    • Wolfgang Maier2
    • Alexandre Cormier1
    • Enis Afgan1
    • Marius van den Beek1
    • Matúš Kalaš1
    • Nate Coraor1
    • Polina Polunina1
    • Saim Momin1
    • Stéphanie Robin1
    • Tom Brown1
    • Verena Moosmann1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning
    • slides3
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows7
    • Associated Training Datasets6
    • Show N_FILTERS more
  • Show disabled materials
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

e-Learning

  • Subscribe via email

Email Subscription

Register training material

Keywords: Assembly

and Contributors: Anthony Bretaudeau

and Resource type: e-learning

7 e-learning materials found
  • e-learning

    Genome Assembly Quality Control

    •• intermediate
    Sequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control
  • e-learning

    Genome assembly using PacBio data

    •• intermediate
    Sequence assembly Genomics Biodiversity Assembly assembly biodiversity pacbio
  • e-learning

    Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
  • e-learning

    Chloroplast genome assembly

    • beginner
    Sequence assembly Assembly biodiversity jbrowse1 nanopore plants
  • e-learning

    Making sense of a newly assembled genome

    • beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
  • e-learning

    Unicycler Assembly

    • beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
Training eSupport System
contact@example.com
Contribute
About TeSS
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.0
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.